Gene : Potri.017G129000 P. trichocarpa v3.0
Defline:  (1 of 1) K00868 - pyridoxine kinase (pdxK, pdxY) Genomic Order:  1290
Name:  ? Potri.017G129000 Secondary Identifier:  ? PAC:26984102
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PLPSAL-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-7204 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.017G129000 0.5kb upstream 0.5kb upstream 9485 true Chr17: 14015737-14025221 Populus trichocarpa
Potri.017G129000 0.5kb upstream 0.5kb upstream 500 false Chr17: 14015737-14016236 Populus trichocarpa
Potri.017G129000 0.5kb downstream 0.5kb downstream 9485 true Chr17: 14016237-14025721 Populus trichocarpa
Potri.017G129000 0.5kb downstream 0.5kb downstream 500 false Chr17: 14025222-14025721 Populus trichocarpa
Potri.017G129000 1.0kb upstream 1.0kb upstream 9985 true Chr17: 14015237-14025221 Populus trichocarpa
Potri.017G129000 1.0kb upstream 1.0kb upstream 1000 false Chr17: 14015237-14016236 Populus trichocarpa
Potri.017G129000 1.0kb downstream 1.0kb downstream 9985 true Chr17: 14016237-14026221 Populus trichocarpa
Potri.017G129000 1.0kb downstream 1.0kb downstream 1000 false Chr17: 14025222-14026221 Populus trichocarpa
Potri.017G129000 2.0kb upstream 2.0kb upstream 10985 true Chr17: 14014237-14025221 Populus trichocarpa
Potri.017G129000 2.0kb upstream 2.0kb upstream 2000 false Chr17: 14014237-14016236 Populus trichocarpa
Potri.017G129000 2.0kb downstream 2.0kb downstream 10985 true Chr17: 14016237-14027221 Populus trichocarpa
Potri.017G129000 2.0kb downstream 2.0kb downstream 2000 false Chr17: 14025222-14027221 Populus trichocarpa
Potri.017G129000 5.0kb upstream 5.0kb upstream 13985 true Chr17: 14011237-14025221 Populus trichocarpa
Potri.017G129000 5.0kb upstream 5.0kb upstream 5000 false Chr17: 14011237-14016236 Populus trichocarpa
Potri.017G129000 5.0kb downstream 5.0kb downstream 13985 true Chr17: 14016237-14030221 Populus trichocarpa
Potri.017G129000 5.0kb downstream 5.0kb downstream 5000 false Chr17: 14025222-14030221 Populus trichocarpa
Potri.017G129000 10.0kb upstream 10.0kb upstream 18985 true Chr17: 14006237-14025221 Populus trichocarpa
Potri.017G129000 10.0kb upstream 10.0kb upstream 10000 false Chr17: 14006237-14016236 Populus trichocarpa
Potri.017G129000 10.0kb downstream 10.0kb downstream 18985 true Chr17: 14016237-14035221 Populus trichocarpa
Potri.017G129000 10.0kb downstream 10.0kb downstream 10000 false Chr17: 14025222-14035221 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.216        
cufflinks 0.202        
cufflinks 0.183        
cufflinks 0.307       High
cufflinks 0.184        
cufflinks 0.216        
cufflinks 0.284       High
cufflinks 0.189        
cufflinks 0.278        
cufflinks 0.259        
cufflinks 0.238        
cufflinks 0.376       High
cufflinks 0.184        
cufflinks 0.195        
cufflinks 0.256        
cufflinks 0.202        
cufflinks 0.132       Low
cufflinks 0.162       Low
cufflinks 0.24        
cufflinks 0.202        
cufflinks 0.242        
cufflinks 0.283       High
cufflinks 0.205        
cufflinks 0.24        
cufflinks 9.901        
cufflinks 8.825        
cufflinks 7.265        
cufflinks 7.102        
cufflinks 8.645        
cufflinks 11.181       High

0 Strain