Gene : Potri.017G007000 P. trichocarpa v3.0
Defline:  (1 of 1) 2.1.1.165 - Methyl halide transferase / Methyl chloride transferase Genomic Order:  70
Name:  ? Potri.017G007000 Secondary Identifier:  ? PAC:26983732
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6730 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.017G007000 0.5kb upstream 0.5kb upstream 3428 true Chr17: 488243-491670 Populus trichocarpa
Potri.017G007000 0.5kb upstream 0.5kb upstream 500 false Chr17: 491171-491670 Populus trichocarpa
Potri.017G007000 0.5kb downstream 0.5kb downstream 3428 true Chr17: 487743-491170 Populus trichocarpa
Potri.017G007000 0.5kb downstream 0.5kb downstream 500 false Chr17: 487743-488242 Populus trichocarpa
Potri.017G007000 1.0kb upstream 1.0kb upstream 3928 true Chr17: 488243-492170 Populus trichocarpa
Potri.017G007000 1.0kb upstream 1.0kb upstream 1000 false Chr17: 491171-492170 Populus trichocarpa
Potri.017G007000 1.0kb downstream 1.0kb downstream 3928 true Chr17: 487243-491170 Populus trichocarpa
Potri.017G007000 1.0kb downstream 1.0kb downstream 1000 false Chr17: 487243-488242 Populus trichocarpa
Potri.017G007000 2.0kb upstream 2.0kb upstream 4928 true Chr17: 488243-493170 Populus trichocarpa
Potri.017G007000 2.0kb upstream 2.0kb upstream 2000 false Chr17: 491171-493170 Populus trichocarpa
Potri.017G007000 2.0kb downstream 2.0kb downstream 4928 true Chr17: 486243-491170 Populus trichocarpa
Potri.017G007000 2.0kb downstream 2.0kb downstream 2000 false Chr17: 486243-488242 Populus trichocarpa
Potri.017G007000 5.0kb upstream 5.0kb upstream 7928 true Chr17: 488243-496170 Populus trichocarpa
Potri.017G007000 5.0kb upstream 5.0kb upstream 5000 false Chr17: 491171-496170 Populus trichocarpa
Potri.017G007000 5.0kb downstream 5.0kb downstream 7928 true Chr17: 483243-491170 Populus trichocarpa
Potri.017G007000 5.0kb downstream 5.0kb downstream 5000 false Chr17: 483243-488242 Populus trichocarpa
Potri.017G007000 10.0kb upstream 10.0kb upstream 12928 true Chr17: 488243-501170 Populus trichocarpa
Potri.017G007000 10.0kb upstream 10.0kb upstream 10000 false Chr17: 491171-501170 Populus trichocarpa
Potri.017G007000 10.0kb downstream 10.0kb downstream 12928 true Chr17: 478243-491170 Populus trichocarpa
Potri.017G007000 10.0kb downstream 10.0kb downstream 10000 false Chr17: 478243-488242 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.312       Low
cufflinks 2.545        
cufflinks 4.235       High
cufflinks 3.98       High
cufflinks 1.94        
cufflinks 1.515        
cufflinks 1.918        
cufflinks 1.511        
cufflinks 1.836        
cufflinks 2.194        
cufflinks 1.957        
cufflinks 1.347       Low
cufflinks 1.734        
cufflinks 2.672        
cufflinks 2.012        
cufflinks 1.701        
cufflinks 1.757        
cufflinks 4.246       High
cufflinks 1.048       Low
cufflinks 2.185        
cufflinks 1.771        
cufflinks 2.165        
cufflinks 1.827        
cufflinks 1.505        
cufflinks 8.827        
cufflinks 10.701        
cufflinks 13.543        
cufflinks 19.241       High
cufflinks 17.343       High
cufflinks 9.514        

0 Strain