Gene : Potri.017G101100 P. trichocarpa v3.0
Defline:  (1 of 1) K10691 - E3 ubiquitin-protein ligase UBR4 (UBR4, ZUBR1) Genomic Order:  1011
Name:  ? Potri.017G101100 Secondary Identifier:  ? PAC:26983345
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7511 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.017G101100 0.5kb upstream 0.5kb upstream 25702 true Chr17: 11801312-11827013 Populus trichocarpa
Potri.017G101100 0.5kb upstream 0.5kb upstream 500 false Chr17: 11801312-11801811 Populus trichocarpa
Potri.017G101100 0.5kb downstream 0.5kb downstream 25702 true Chr17: 11801812-11827513 Populus trichocarpa
Potri.017G101100 0.5kb downstream 0.5kb downstream 500 false Chr17: 11827014-11827513 Populus trichocarpa
Potri.017G101100 1.0kb upstream 1.0kb upstream 26202 true Chr17: 11800812-11827013 Populus trichocarpa
Potri.017G101100 1.0kb upstream 1.0kb upstream 1000 false Chr17: 11800812-11801811 Populus trichocarpa
Potri.017G101100 1.0kb downstream 1.0kb downstream 26202 true Chr17: 11801812-11828013 Populus trichocarpa
Potri.017G101100 1.0kb downstream 1.0kb downstream 1000 false Chr17: 11827014-11828013 Populus trichocarpa
Potri.017G101100 2.0kb upstream 2.0kb upstream 27202 true Chr17: 11799812-11827013 Populus trichocarpa
Potri.017G101100 2.0kb upstream 2.0kb upstream 2000 false Chr17: 11799812-11801811 Populus trichocarpa
Potri.017G101100 2.0kb downstream 2.0kb downstream 27202 true Chr17: 11801812-11829013 Populus trichocarpa
Potri.017G101100 2.0kb downstream 2.0kb downstream 2000 false Chr17: 11827014-11829013 Populus trichocarpa
Potri.017G101100 5.0kb upstream 5.0kb upstream 30202 true Chr17: 11796812-11827013 Populus trichocarpa
Potri.017G101100 5.0kb upstream 5.0kb upstream 5000 false Chr17: 11796812-11801811 Populus trichocarpa
Potri.017G101100 5.0kb downstream 5.0kb downstream 30202 true Chr17: 11801812-11832013 Populus trichocarpa
Potri.017G101100 5.0kb downstream 5.0kb downstream 5000 false Chr17: 11827014-11832013 Populus trichocarpa
Potri.017G101100 10.0kb upstream 10.0kb upstream 35202 true Chr17: 11791812-11827013 Populus trichocarpa
Potri.017G101100 10.0kb upstream 10.0kb upstream 10000 false Chr17: 11791812-11801811 Populus trichocarpa
Potri.017G101100 10.0kb downstream 10.0kb downstream 35202 true Chr17: 11801812-11837013 Populus trichocarpa
Potri.017G101100 10.0kb downstream 10.0kb downstream 10000 false Chr17: 11827014-11837013 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.744       Low
cufflinks 2.163       Low
cufflinks 2.573        
cufflinks 4.908       High
cufflinks 2.177       Low
cufflinks 5.282       High
cufflinks 4.445       High
cufflinks 2.296        
cufflinks 2.407        
cufflinks 3.538        
cufflinks 2.986        
cufflinks 4.022        
cufflinks 3.747        
cufflinks 2.388        
cufflinks 3.989        
cufflinks 2.111       Low
cufflinks 2.29        
cufflinks 4.763       High
cufflinks 2.798        
cufflinks 1.98       Low
cufflinks 5.968       High
cufflinks 1.952       Low
cufflinks 3.991        
cufflinks 3.127        
cufflinks 3.65        
cufflinks 44.771     High High
cufflinks 40.583     High  
cufflinks 25.603        
cufflinks 19.49        
cufflinks 38.335     High  

0 Strain