Gene : Potri.017G105400 P. trichocarpa v3.0
Defline:  (1 of 18) PTHR10102//PTHR10102:SF3 - DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL // SUBFAMILY NOT NAMED Genomic Order:  1054
Name:  ? Potri.017G105400 Secondary Identifier:  ? PAC:26985536
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.017G105400 0.5kb upstream 0.5kb upstream 5062 true Chr17: 12245886-12250947 Populus trichocarpa
Potri.017G105400 0.5kb upstream 0.5kb upstream 500 false Chr17: 12245886-12246385 Populus trichocarpa
Potri.017G105400 0.5kb downstream 0.5kb downstream 5062 true Chr17: 12246386-12251447 Populus trichocarpa
Potri.017G105400 0.5kb downstream 0.5kb downstream 500 false Chr17: 12250948-12251447 Populus trichocarpa
Potri.017G105400 1.0kb upstream 1.0kb upstream 5562 true Chr17: 12245386-12250947 Populus trichocarpa
Potri.017G105400 1.0kb upstream 1.0kb upstream 1000 false Chr17: 12245386-12246385 Populus trichocarpa
Potri.017G105400 1.0kb downstream 1.0kb downstream 5562 true Chr17: 12246386-12251947 Populus trichocarpa
Potri.017G105400 1.0kb downstream 1.0kb downstream 1000 false Chr17: 12250948-12251947 Populus trichocarpa
Potri.017G105400 2.0kb upstream 2.0kb upstream 6562 true Chr17: 12244386-12250947 Populus trichocarpa
Potri.017G105400 2.0kb upstream 2.0kb upstream 2000 false Chr17: 12244386-12246385 Populus trichocarpa
Potri.017G105400 2.0kb downstream 2.0kb downstream 6562 true Chr17: 12246386-12252947 Populus trichocarpa
Potri.017G105400 2.0kb downstream 2.0kb downstream 2000 false Chr17: 12250948-12252947 Populus trichocarpa
Potri.017G105400 5.0kb upstream 5.0kb upstream 9562 true Chr17: 12241386-12250947 Populus trichocarpa
Potri.017G105400 5.0kb upstream 5.0kb upstream 5000 false Chr17: 12241386-12246385 Populus trichocarpa
Potri.017G105400 5.0kb downstream 5.0kb downstream 9562 true Chr17: 12246386-12255947 Populus trichocarpa
Potri.017G105400 5.0kb downstream 5.0kb downstream 5000 false Chr17: 12250948-12255947 Populus trichocarpa
Potri.017G105400 10.0kb upstream 10.0kb upstream 14562 true Chr17: 12236386-12250947 Populus trichocarpa
Potri.017G105400 10.0kb upstream 10.0kb upstream 10000 false Chr17: 12236386-12246385 Populus trichocarpa
Potri.017G105400 10.0kb downstream 10.0kb downstream 14562 true Chr17: 12246386-12260947 Populus trichocarpa
Potri.017G105400 10.0kb downstream 10.0kb downstream 10000 false Chr17: 12250948-12260947 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.043     Low Low
cufflinks 0.155        
cufflinks 0.51        
cufflinks 0.235        
cufflinks 0.204        
cufflinks 0.682       High
cufflinks 0.257        
cufflinks 0.228        
cufflinks 0.216        
cufflinks 0.141     Low  
cufflinks 0.22        
cufflinks 0.019     Low Low
cufflinks 0.061     Low Low
cufflinks 0.338        
cufflinks 0.356        
cufflinks 0.216        
cufflinks 1.412       High
cufflinks 0.261        
cufflinks 0.736       High
cufflinks 0.28        
cufflinks 0.889       High
cufflinks 0.046     Low Low
cufflinks 0.393        
cufflinks 0.123     Low  
cufflinks 1.88        
cufflinks 3.189       High
cufflinks 2.141        
cufflinks 2.541        
cufflinks 2.05        
cufflinks 2.781       High

0 Strain