Gene : Potri.017G139700 P. trichocarpa v3.0
Defline:  (1 of 1) K08339 - autophagy-related protein 5 (ATG5) Genomic Order:  1397
Name:  ? Potri.017G139700 Secondary Identifier:  ? PAC:26985505
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.017G139700 0.5kb upstream 0.5kb upstream 5635 true Chr17: 14774557-14780191 Populus trichocarpa
Potri.017G139700 0.5kb upstream 0.5kb upstream 500 false Chr17: 14779692-14780191 Populus trichocarpa
Potri.017G139700 0.5kb downstream 0.5kb downstream 5635 true Chr17: 14774057-14779691 Populus trichocarpa
Potri.017G139700 0.5kb downstream 0.5kb downstream 500 false Chr17: 14774057-14774556 Populus trichocarpa
Potri.017G139700 1.0kb upstream 1.0kb upstream 6135 true Chr17: 14774557-14780691 Populus trichocarpa
Potri.017G139700 1.0kb upstream 1.0kb upstream 1000 false Chr17: 14779692-14780691 Populus trichocarpa
Potri.017G139700 1.0kb downstream 1.0kb downstream 6135 true Chr17: 14773557-14779691 Populus trichocarpa
Potri.017G139700 1.0kb downstream 1.0kb downstream 1000 false Chr17: 14773557-14774556 Populus trichocarpa
Potri.017G139700 2.0kb upstream 2.0kb upstream 7135 true Chr17: 14774557-14781691 Populus trichocarpa
Potri.017G139700 2.0kb upstream 2.0kb upstream 2000 false Chr17: 14779692-14781691 Populus trichocarpa
Potri.017G139700 2.0kb downstream 2.0kb downstream 7135 true Chr17: 14772557-14779691 Populus trichocarpa
Potri.017G139700 2.0kb downstream 2.0kb downstream 2000 false Chr17: 14772557-14774556 Populus trichocarpa
Potri.017G139700 5.0kb upstream 5.0kb upstream 10135 true Chr17: 14774557-14784691 Populus trichocarpa
Potri.017G139700 5.0kb upstream 5.0kb upstream 5000 false Chr17: 14779692-14784691 Populus trichocarpa
Potri.017G139700 5.0kb downstream 5.0kb downstream 10135 true Chr17: 14769557-14779691 Populus trichocarpa
Potri.017G139700 5.0kb downstream 5.0kb downstream 5000 false Chr17: 14769557-14774556 Populus trichocarpa
Potri.017G139700 10.0kb upstream 10.0kb upstream 15135 true Chr17: 14774557-14789691 Populus trichocarpa
Potri.017G139700 10.0kb upstream 10.0kb upstream 10000 false Chr17: 14779692-14789691 Populus trichocarpa
Potri.017G139700 10.0kb downstream 10.0kb downstream 15135 true Chr17: 14764557-14779691 Populus trichocarpa
Potri.017G139700 10.0kb downstream 10.0kb downstream 10000 false Chr17: 14764557-14774556 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.719       High
cufflinks 2.469        
cufflinks 1.951        
cufflinks 2.787       High
cufflinks 1.817        
cufflinks 2.016        
cufflinks 1.73        
cufflinks 2.674       High
cufflinks 2.723       High
cufflinks 2.061        
cufflinks 2.463        
cufflinks 1.372       Low
cufflinks 1.882        
cufflinks 2.434        
cufflinks 1.981        
cufflinks 2.984       High
cufflinks 1.299       Low
cufflinks 1.611       Low
cufflinks 2.293        
cufflinks 2.729       High
cufflinks 1.765        
cufflinks 1.906        
cufflinks 1.668        
cufflinks 1.544       Low
cufflinks 11.523        
cufflinks 10.994        
cufflinks 13.108       High
cufflinks 10.077        
cufflinks 13.012       High
cufflinks 13.254       High

0 Strain