Gene : Potri.017G080300 P. trichocarpa v3.0
Defline:  (1 of 1) 1.4.1.24 - 3-dehydroquinate synthase II / DHQ synthase II Genomic Order:  803
Name:  ? Potri.017G080300 Secondary Identifier:  ? PAC:26984143
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.017G080300 0.5kb upstream 0.5kb upstream 4865 true Chr17: 9412676-9417540 Populus trichocarpa
Potri.017G080300 0.5kb upstream 0.5kb upstream 500 false Chr17: 9412676-9413175 Populus trichocarpa
Potri.017G080300 0.5kb downstream 0.5kb downstream 4865 true Chr17: 9413176-9418040 Populus trichocarpa
Potri.017G080300 0.5kb downstream 0.5kb downstream 500 false Chr17: 9417541-9418040 Populus trichocarpa
Potri.017G080300 1.0kb upstream 1.0kb upstream 5365 true Chr17: 9412176-9417540 Populus trichocarpa
Potri.017G080300 1.0kb upstream 1.0kb upstream 1000 false Chr17: 9412176-9413175 Populus trichocarpa
Potri.017G080300 1.0kb downstream 1.0kb downstream 5365 true Chr17: 9413176-9418540 Populus trichocarpa
Potri.017G080300 1.0kb downstream 1.0kb downstream 1000 false Chr17: 9417541-9418540 Populus trichocarpa
Potri.017G080300 2.0kb upstream 2.0kb upstream 6365 true Chr17: 9411176-9417540 Populus trichocarpa
Potri.017G080300 2.0kb upstream 2.0kb upstream 2000 false Chr17: 9411176-9413175 Populus trichocarpa
Potri.017G080300 2.0kb downstream 2.0kb downstream 6365 true Chr17: 9413176-9419540 Populus trichocarpa
Potri.017G080300 2.0kb downstream 2.0kb downstream 2000 false Chr17: 9417541-9419540 Populus trichocarpa
Potri.017G080300 5.0kb upstream 5.0kb upstream 9365 true Chr17: 9408176-9417540 Populus trichocarpa
Potri.017G080300 5.0kb upstream 5.0kb upstream 5000 false Chr17: 9408176-9413175 Populus trichocarpa
Potri.017G080300 5.0kb downstream 5.0kb downstream 9365 true Chr17: 9413176-9422540 Populus trichocarpa
Potri.017G080300 5.0kb downstream 5.0kb downstream 5000 false Chr17: 9417541-9422540 Populus trichocarpa
Potri.017G080300 10.0kb upstream 10.0kb upstream 14365 true Chr17: 9403176-9417540 Populus trichocarpa
Potri.017G080300 10.0kb upstream 10.0kb upstream 10000 false Chr17: 9403176-9413175 Populus trichocarpa
Potri.017G080300 10.0kb downstream 10.0kb downstream 14365 true Chr17: 9413176-9427540 Populus trichocarpa
Potri.017G080300 10.0kb downstream 10.0kb downstream 10000 false Chr17: 9417541-9427540 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.923       Low
cufflinks 1.06       Low
cufflinks 2.814       High
cufflinks 0.822       Low
cufflinks 2.192        
cufflinks 2.824       High
cufflinks 2.465        
cufflinks 2.56        
cufflinks 2.228        
cufflinks 1.454        
cufflinks 2.662        
cufflinks 1.655        
cufflinks 2.349        
cufflinks 1.221        
cufflinks 2.033        
cufflinks 2.36        
cufflinks 0.958       Low
cufflinks 2.458        
cufflinks 0.689       Low
cufflinks 1.266        
cufflinks 2.174        
cufflinks 1.096       Low
cufflinks 2.344        
cufflinks 2.571        
cufflinks 4.018        
cufflinks 6.16        
cufflinks 11.159       High
cufflinks 10.236       High
cufflinks 11.117       High
cufflinks 4.918        

0 Strain