Gene : Potri.017G029200 P. trichocarpa v3.0
Defline:  (1 of 3) K01409 - N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234] (KAE1, tsaD, QRI7) Genomic Order:  292
Name:  ? Potri.017G029200 Secondary Identifier:  ? PAC:26984341
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY0-1587 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.017G029200 0.5kb upstream 0.5kb upstream 4280 true Chr17: 2578319-2582598 Populus trichocarpa
Potri.017G029200 0.5kb upstream 0.5kb upstream 500 false Chr17: 2578319-2578818 Populus trichocarpa
Potri.017G029200 0.5kb downstream 0.5kb downstream 4280 true Chr17: 2578819-2583098 Populus trichocarpa
Potri.017G029200 0.5kb downstream 0.5kb downstream 500 false Chr17: 2582599-2583098 Populus trichocarpa
Potri.017G029200 1.0kb upstream 1.0kb upstream 4780 true Chr17: 2577819-2582598 Populus trichocarpa
Potri.017G029200 1.0kb upstream 1.0kb upstream 1000 false Chr17: 2577819-2578818 Populus trichocarpa
Potri.017G029200 1.0kb downstream 1.0kb downstream 4780 true Chr17: 2578819-2583598 Populus trichocarpa
Potri.017G029200 1.0kb downstream 1.0kb downstream 1000 false Chr17: 2582599-2583598 Populus trichocarpa
Potri.017G029200 2.0kb upstream 2.0kb upstream 5780 true Chr17: 2576819-2582598 Populus trichocarpa
Potri.017G029200 2.0kb upstream 2.0kb upstream 2000 false Chr17: 2576819-2578818 Populus trichocarpa
Potri.017G029200 2.0kb downstream 2.0kb downstream 5780 true Chr17: 2578819-2584598 Populus trichocarpa
Potri.017G029200 2.0kb downstream 2.0kb downstream 2000 false Chr17: 2582599-2584598 Populus trichocarpa
Potri.017G029200 5.0kb upstream 5.0kb upstream 8780 true Chr17: 2573819-2582598 Populus trichocarpa
Potri.017G029200 5.0kb upstream 5.0kb upstream 5000 false Chr17: 2573819-2578818 Populus trichocarpa
Potri.017G029200 5.0kb downstream 5.0kb downstream 8780 true Chr17: 2578819-2587598 Populus trichocarpa
Potri.017G029200 5.0kb downstream 5.0kb downstream 5000 false Chr17: 2582599-2587598 Populus trichocarpa
Potri.017G029200 10.0kb upstream 10.0kb upstream 13780 true Chr17: 2568819-2582598 Populus trichocarpa
Potri.017G029200 10.0kb upstream 10.0kb upstream 10000 false Chr17: 2568819-2578818 Populus trichocarpa
Potri.017G029200 10.0kb downstream 10.0kb downstream 13780 true Chr17: 2578819-2592598 Populus trichocarpa
Potri.017G029200 10.0kb downstream 10.0kb downstream 10000 false Chr17: 2582599-2592598 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.559       Low
cufflinks 1.195       High
cufflinks 0.603        
cufflinks 0.377       Low
cufflinks 0.84        
cufflinks 0.696        
cufflinks 1.117        
cufflinks 1.369       High
cufflinks 0.698        
cufflinks 0.793        
cufflinks 0.89        
cufflinks 0.78        
cufflinks 0.994        
cufflinks 0.436       Low
cufflinks 1.04        
cufflinks 1.01        
cufflinks 1.042        
cufflinks 0.777        
cufflinks 1.359       High
cufflinks 1.014        
cufflinks 0.788        
cufflinks 1.058        
cufflinks 0.594       Low
cufflinks 1.198       High
cufflinks 7.099        
cufflinks 9.954       High
cufflinks 9.58        
cufflinks 8.509        
cufflinks 6.914       Low
cufflinks 10.152       High

0 Strain