Gene : Potri.017G149100 P. trichocarpa v3.0
Defline:  (1 of 2) K03949 - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 5 (NDUFA5) Genomic Order:  1491
Name:  ? Potri.017G149100 Secondary Identifier:  ? PAC:26983875
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5083 Populus trichocarpa pathologic  
Ptrichocarpa PWY-4302 Populus trichocarpa pathologic  
Ptrichocarpa PWY-3781 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.017G149100 0.5kb upstream 0.5kb upstream 3312 true Chr17: 15516708-15520019 Populus trichocarpa
Potri.017G149100 0.5kb upstream 0.5kb upstream 500 false Chr17: 15516708-15517207 Populus trichocarpa
Potri.017G149100 0.5kb downstream 0.5kb downstream 3312 true Chr17: 15517208-15520519 Populus trichocarpa
Potri.017G149100 0.5kb downstream 0.5kb downstream 500 false Chr17: 15520020-15520519 Populus trichocarpa
Potri.017G149100 1.0kb upstream 1.0kb upstream 3812 true Chr17: 15516208-15520019 Populus trichocarpa
Potri.017G149100 1.0kb upstream 1.0kb upstream 1000 false Chr17: 15516208-15517207 Populus trichocarpa
Potri.017G149100 1.0kb downstream 1.0kb downstream 3812 true Chr17: 15517208-15521019 Populus trichocarpa
Potri.017G149100 1.0kb downstream 1.0kb downstream 1000 false Chr17: 15520020-15521019 Populus trichocarpa
Potri.017G149100 2.0kb upstream 2.0kb upstream 4812 true Chr17: 15515208-15520019 Populus trichocarpa
Potri.017G149100 2.0kb upstream 2.0kb upstream 2000 false Chr17: 15515208-15517207 Populus trichocarpa
Potri.017G149100 2.0kb downstream 2.0kb downstream 4812 true Chr17: 15517208-15522019 Populus trichocarpa
Potri.017G149100 2.0kb downstream 2.0kb downstream 2000 false Chr17: 15520020-15522019 Populus trichocarpa
Potri.017G149100 5.0kb upstream 5.0kb upstream 7812 true Chr17: 15512208-15520019 Populus trichocarpa
Potri.017G149100 5.0kb upstream 5.0kb upstream 5000 false Chr17: 15512208-15517207 Populus trichocarpa
Potri.017G149100 5.0kb downstream 5.0kb downstream 7812 true Chr17: 15517208-15525019 Populus trichocarpa
Potri.017G149100 5.0kb downstream 5.0kb downstream 5000 false Chr17: 15520020-15525019 Populus trichocarpa
Potri.017G149100 10.0kb upstream 10.0kb upstream 12812 true Chr17: 15507208-15520019 Populus trichocarpa
Potri.017G149100 10.0kb upstream 10.0kb upstream 10000 false Chr17: 15507208-15517207 Populus trichocarpa
Potri.017G149100 10.0kb downstream 10.0kb downstream 12812 true Chr17: 15517208-15530019 Populus trichocarpa
Potri.017G149100 10.0kb downstream 10.0kb downstream 10000 false Chr17: 15520020-15530019 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.631       High
cufflinks 1.199       Low
cufflinks 1.61       Low
cufflinks 0.649       Low
cufflinks 3.098        
cufflinks 2.367        
cufflinks 2.669        
cufflinks 1.693        
cufflinks 3.143        
cufflinks 3.22        
cufflinks 3.321        
cufflinks 2.443        
cufflinks 3.228        
cufflinks 2.351        
cufflinks 3.282        
cufflinks 2.015        
cufflinks 2.021        
cufflinks 2.579        
cufflinks 4.405       High
cufflinks 2.738        
cufflinks 3.079        
cufflinks 3.184        
cufflinks 1.902        
cufflinks 3.51        
cufflinks 1.501        
cufflinks 0.81        
cufflinks 1.323        
cufflinks 1.996        
cufflinks 3.751       High
cufflinks 0.124     Low Low

0 Strain