Gene : Potri.017G028500 P. trichocarpa v3.0
Defline:  (1 of 4) PTHR14083//PTHR14083:SF5 - YIP1 INTERACTING FACTOR HOMOLOG YIF1 PROTEIN // HRF1 PROTEIN Genomic Order:  285
Name:  ? Potri.017G028500 Secondary Identifier:  ? PAC:26984068
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.017G028500 0.5kb upstream 0.5kb upstream 3898 true Chr17: 2533156-2537053 Populus trichocarpa
Potri.017G028500 0.5kb upstream 0.5kb upstream 500 false Chr17: 2536554-2537053 Populus trichocarpa
Potri.017G028500 0.5kb downstream 0.5kb downstream 3898 true Chr17: 2532656-2536553 Populus trichocarpa
Potri.017G028500 0.5kb downstream 0.5kb downstream 500 false Chr17: 2532656-2533155 Populus trichocarpa
Potri.017G028500 1.0kb upstream 1.0kb upstream 4398 true Chr17: 2533156-2537553 Populus trichocarpa
Potri.017G028500 1.0kb upstream 1.0kb upstream 1000 false Chr17: 2536554-2537553 Populus trichocarpa
Potri.017G028500 1.0kb downstream 1.0kb downstream 4398 true Chr17: 2532156-2536553 Populus trichocarpa
Potri.017G028500 1.0kb downstream 1.0kb downstream 1000 false Chr17: 2532156-2533155 Populus trichocarpa
Potri.017G028500 2.0kb upstream 2.0kb upstream 5398 true Chr17: 2533156-2538553 Populus trichocarpa
Potri.017G028500 2.0kb upstream 2.0kb upstream 2000 false Chr17: 2536554-2538553 Populus trichocarpa
Potri.017G028500 2.0kb downstream 2.0kb downstream 5398 true Chr17: 2531156-2536553 Populus trichocarpa
Potri.017G028500 2.0kb downstream 2.0kb downstream 2000 false Chr17: 2531156-2533155 Populus trichocarpa
Potri.017G028500 5.0kb upstream 5.0kb upstream 8398 true Chr17: 2533156-2541553 Populus trichocarpa
Potri.017G028500 5.0kb upstream 5.0kb upstream 5000 false Chr17: 2536554-2541553 Populus trichocarpa
Potri.017G028500 5.0kb downstream 5.0kb downstream 8398 true Chr17: 2528156-2536553 Populus trichocarpa
Potri.017G028500 5.0kb downstream 5.0kb downstream 5000 false Chr17: 2528156-2533155 Populus trichocarpa
Potri.017G028500 10.0kb upstream 10.0kb upstream 13398 true Chr17: 2533156-2546553 Populus trichocarpa
Potri.017G028500 10.0kb upstream 10.0kb upstream 10000 false Chr17: 2536554-2546553 Populus trichocarpa
Potri.017G028500 10.0kb downstream 10.0kb downstream 13398 true Chr17: 2523156-2536553 Populus trichocarpa
Potri.017G028500 10.0kb downstream 10.0kb downstream 10000 false Chr17: 2523156-2533155 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.261       Low
cufflinks 2.93        
cufflinks 4.503       High
cufflinks 3.51        
cufflinks 3.767        
cufflinks 3.443        
cufflinks 3.249        
cufflinks 3.197        
cufflinks 4.48       High
cufflinks 3.578        
cufflinks 3.037        
cufflinks 3.067        
cufflinks 4.051       High
cufflinks 2.525       Low
cufflinks 2.804        
cufflinks 3.044        
cufflinks 3.56        
cufflinks 3.532        
cufflinks 2.374       Low
cufflinks 3.147        
cufflinks 2.914        
cufflinks 3.62        
cufflinks 4.273       High
cufflinks 2.669       Low
cufflinks 12.293        
cufflinks 12.545        
cufflinks 14.874        
cufflinks 18.73       High
cufflinks 18.235       High
cufflinks 14.755        

0 Strain