Gene : Potri.017G109300 P. trichocarpa v3.0
Defline:  (1 of 2) 1.5.5.2 - Proline dehydrogenase Genomic Order:  1093
Name:  ? Potri.017G109300 Secondary Identifier:  ? PAC:26984908
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PROUT-PWY Populus trichocarpa pathologic  
Ptrichocarpa CITRULBIO-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-6922 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.017G109300 0.5kb upstream 0.5kb upstream 3140 true Chr17: 12528703-12531842 Populus trichocarpa
Potri.017G109300 0.5kb upstream 0.5kb upstream 500 false Chr17: 12531343-12531842 Populus trichocarpa
Potri.017G109300 0.5kb downstream 0.5kb downstream 3140 true Chr17: 12528203-12531342 Populus trichocarpa
Potri.017G109300 0.5kb downstream 0.5kb downstream 500 false Chr17: 12528203-12528702 Populus trichocarpa
Potri.017G109300 1.0kb upstream 1.0kb upstream 3640 true Chr17: 12528703-12532342 Populus trichocarpa
Potri.017G109300 1.0kb upstream 1.0kb upstream 1000 false Chr17: 12531343-12532342 Populus trichocarpa
Potri.017G109300 1.0kb downstream 1.0kb downstream 3640 true Chr17: 12527703-12531342 Populus trichocarpa
Potri.017G109300 1.0kb downstream 1.0kb downstream 1000 false Chr17: 12527703-12528702 Populus trichocarpa
Potri.017G109300 2.0kb upstream 2.0kb upstream 4640 true Chr17: 12528703-12533342 Populus trichocarpa
Potri.017G109300 2.0kb upstream 2.0kb upstream 2000 false Chr17: 12531343-12533342 Populus trichocarpa
Potri.017G109300 2.0kb downstream 2.0kb downstream 4640 true Chr17: 12526703-12531342 Populus trichocarpa
Potri.017G109300 2.0kb downstream 2.0kb downstream 2000 false Chr17: 12526703-12528702 Populus trichocarpa
Potri.017G109300 5.0kb upstream 5.0kb upstream 7640 true Chr17: 12528703-12536342 Populus trichocarpa
Potri.017G109300 5.0kb upstream 5.0kb upstream 5000 false Chr17: 12531343-12536342 Populus trichocarpa
Potri.017G109300 5.0kb downstream 5.0kb downstream 7640 true Chr17: 12523703-12531342 Populus trichocarpa
Potri.017G109300 5.0kb downstream 5.0kb downstream 5000 false Chr17: 12523703-12528702 Populus trichocarpa
Potri.017G109300 10.0kb upstream 10.0kb upstream 12640 true Chr17: 12528703-12541342 Populus trichocarpa
Potri.017G109300 10.0kb upstream 10.0kb upstream 10000 false Chr17: 12531343-12541342 Populus trichocarpa
Potri.017G109300 10.0kb downstream 10.0kb downstream 12640 true Chr17: 12518703-12531342 Populus trichocarpa
Potri.017G109300 10.0kb downstream 10.0kb downstream 10000 false Chr17: 12518703-12528702 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.053        
cufflinks 5.145        
cufflinks 3.569        
cufflinks 0.723        
cufflinks 0.275       Low
cufflinks 1.993        
cufflinks 2.727        
cufflinks 0.266       Low
cufflinks 5.597        
cufflinks 1.763        
cufflinks 0.547       Low
cufflinks 1.965        
cufflinks 0.449       Low
cufflinks 0.419       Low
cufflinks 3.699        
cufflinks 7.5       High
cufflinks 2.238        
cufflinks 12.603     High High
cufflinks 9.161       High
cufflinks 5.91        
cufflinks 0.935        
cufflinks 6.927       High
cufflinks 0.513       Low
cufflinks 1.414        
cufflinks 0.477        
cufflinks 1.593        
cufflinks 5.781       High
cufflinks 0.89        
cufflinks 2.456        
cufflinks 0.718        

0 Strain