Gene : Potri.017G109500 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR31209//PTHR31209:SF0 - FAMILY NOT NAMED // COFACTOR-INDEPENDENT PHOSPHOGLYCERATE MUTASE Genomic Order:  1095
Name:  ? Potri.017G109500 Secondary Identifier:  ? PAC:26985044
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-1042 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5464 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5723 Populus trichocarpa pathologic  
Ptrichocarpa GLUCONEO-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.017G109500 0.5kb upstream 0.5kb upstream 6609 true Chr17: 12537648-12544256 Populus trichocarpa
Potri.017G109500 0.5kb upstream 0.5kb upstream 500 false Chr17: 12537648-12538147 Populus trichocarpa
Potri.017G109500 0.5kb downstream 0.5kb downstream 6609 true Chr17: 12538148-12544756 Populus trichocarpa
Potri.017G109500 0.5kb downstream 0.5kb downstream 500 false Chr17: 12544257-12544756 Populus trichocarpa
Potri.017G109500 1.0kb upstream 1.0kb upstream 7109 true Chr17: 12537148-12544256 Populus trichocarpa
Potri.017G109500 1.0kb upstream 1.0kb upstream 1000 false Chr17: 12537148-12538147 Populus trichocarpa
Potri.017G109500 1.0kb downstream 1.0kb downstream 7109 true Chr17: 12538148-12545256 Populus trichocarpa
Potri.017G109500 1.0kb downstream 1.0kb downstream 1000 false Chr17: 12544257-12545256 Populus trichocarpa
Potri.017G109500 2.0kb upstream 2.0kb upstream 8109 true Chr17: 12536148-12544256 Populus trichocarpa
Potri.017G109500 2.0kb upstream 2.0kb upstream 2000 false Chr17: 12536148-12538147 Populus trichocarpa
Potri.017G109500 2.0kb downstream 2.0kb downstream 8109 true Chr17: 12538148-12546256 Populus trichocarpa
Potri.017G109500 2.0kb downstream 2.0kb downstream 2000 false Chr17: 12544257-12546256 Populus trichocarpa
Potri.017G109500 5.0kb upstream 5.0kb upstream 11109 true Chr17: 12533148-12544256 Populus trichocarpa
Potri.017G109500 5.0kb upstream 5.0kb upstream 5000 false Chr17: 12533148-12538147 Populus trichocarpa
Potri.017G109500 5.0kb downstream 5.0kb downstream 11109 true Chr17: 12538148-12549256 Populus trichocarpa
Potri.017G109500 5.0kb downstream 5.0kb downstream 5000 false Chr17: 12544257-12549256 Populus trichocarpa
Potri.017G109500 10.0kb upstream 10.0kb upstream 16109 true Chr17: 12528148-12544256 Populus trichocarpa
Potri.017G109500 10.0kb upstream 10.0kb upstream 10000 false Chr17: 12528148-12538147 Populus trichocarpa
Potri.017G109500 10.0kb downstream 10.0kb downstream 16109 true Chr17: 12538148-12554256 Populus trichocarpa
Potri.017G109500 10.0kb downstream 10.0kb downstream 10000 false Chr17: 12544257-12554256 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.721       Low
cufflinks 1.707        
cufflinks 0.914        
cufflinks 1.793        
cufflinks 1.732        
cufflinks 1.188        
cufflinks 0.851       Low
cufflinks 1.681        
cufflinks 1.223        
cufflinks 2.236       High
cufflinks 0.783       Low
cufflinks 1.836        
cufflinks 2.04       High
cufflinks 0.952        
cufflinks 1.197        
cufflinks 0.725       Low
cufflinks 1.075        
cufflinks 0.958        
cufflinks 1.869       High
cufflinks 1.237        
cufflinks 0.729       Low
cufflinks 2.212       High
cufflinks 1.155        
cufflinks 1.893       High
cufflinks 3.626        
cufflinks 4.221        
cufflinks 4.735        
cufflinks 4.521        
cufflinks 5.571       High
cufflinks 4.458        

0 Strain