Gene : Potri.017G112400 P. trichocarpa v3.0
Defline:  (1 of 3) 5.3.99.6 - Allene-oxide cyclase Genomic Order:  1124
Name:  ? Potri.017G112400 Secondary Identifier:  ? PAC:26985495
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-735 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.017G112400 0.5kb upstream 0.5kb upstream 1384 true Chr17: 12803232-12804615 Populus trichocarpa
Potri.017G112400 0.5kb upstream 0.5kb upstream 500 false Chr17: 12803232-12803731 Populus trichocarpa
Potri.017G112400 0.5kb downstream 0.5kb downstream 1384 true Chr17: 12803732-12805115 Populus trichocarpa
Potri.017G112400 0.5kb downstream 0.5kb downstream 500 false Chr17: 12804616-12805115 Populus trichocarpa
Potri.017G112400 1.0kb upstream 1.0kb upstream 1884 true Chr17: 12802732-12804615 Populus trichocarpa
Potri.017G112400 1.0kb upstream 1.0kb upstream 1000 false Chr17: 12802732-12803731 Populus trichocarpa
Potri.017G112400 1.0kb downstream 1.0kb downstream 1884 true Chr17: 12803732-12805615 Populus trichocarpa
Potri.017G112400 1.0kb downstream 1.0kb downstream 1000 false Chr17: 12804616-12805615 Populus trichocarpa
Potri.017G112400 2.0kb upstream 2.0kb upstream 2884 true Chr17: 12801732-12804615 Populus trichocarpa
Potri.017G112400 2.0kb upstream 2.0kb upstream 2000 false Chr17: 12801732-12803731 Populus trichocarpa
Potri.017G112400 2.0kb downstream 2.0kb downstream 2884 true Chr17: 12803732-12806615 Populus trichocarpa
Potri.017G112400 2.0kb downstream 2.0kb downstream 2000 false Chr17: 12804616-12806615 Populus trichocarpa
Potri.017G112400 5.0kb upstream 5.0kb upstream 5884 true Chr17: 12798732-12804615 Populus trichocarpa
Potri.017G112400 5.0kb upstream 5.0kb upstream 5000 false Chr17: 12798732-12803731 Populus trichocarpa
Potri.017G112400 5.0kb downstream 5.0kb downstream 5884 true Chr17: 12803732-12809615 Populus trichocarpa
Potri.017G112400 5.0kb downstream 5.0kb downstream 5000 false Chr17: 12804616-12809615 Populus trichocarpa
Potri.017G112400 10.0kb upstream 10.0kb upstream 10884 true Chr17: 12793732-12804615 Populus trichocarpa
Potri.017G112400 10.0kb upstream 10.0kb upstream 10000 false Chr17: 12793732-12803731 Populus trichocarpa
Potri.017G112400 10.0kb downstream 10.0kb downstream 10884 true Chr17: 12803732-12814615 Populus trichocarpa
Potri.017G112400 10.0kb downstream 10.0kb downstream 10000 false Chr17: 12804616-12814615 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.753        
cufflinks 0.523        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.209       High
cufflinks 0.689        
cufflinks 0.009     Low Low
cufflinks 0.034     Low Low
cufflinks 1.279       High
cufflinks 0.296        
cufflinks 0.217        
cufflinks 0.03     Low Low
cufflinks 2.42       High
cufflinks 0.015     Low Low
cufflinks 0.257        
cufflinks 0.49        
cufflinks 0.197        
cufflinks 0.8        
cufflinks 0.02     Low Low
cufflinks 0.454        
cufflinks 0.271        
cufflinks 0.066     Low  
cufflinks 0.933        
cufflinks 0.44        
cufflinks 0.808        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.241     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain