Gene : Potri.018G145700 P. trichocarpa v3.0
Defline:  (1 of 3) K12446 - L-arabinokinase (E2.7.1.46) Genomic Order:  1457
Name:  ? Potri.018G145700 Secondary Identifier:  ? PAC:27011091
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-82 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.018G145700 0.5kb upstream 0.5kb upstream 8568 true Chr18: 16509036-16517603 Populus trichocarpa
Potri.018G145700 0.5kb upstream 0.5kb upstream 500 false Chr18: 16509036-16509535 Populus trichocarpa
Potri.018G145700 0.5kb downstream 0.5kb downstream 8568 true Chr18: 16509536-16518103 Populus trichocarpa
Potri.018G145700 0.5kb downstream 0.5kb downstream 500 false Chr18: 16517604-16518103 Populus trichocarpa
Potri.018G145700 1.0kb upstream 1.0kb upstream 9068 true Chr18: 16508536-16517603 Populus trichocarpa
Potri.018G145700 1.0kb upstream 1.0kb upstream 1000 false Chr18: 16508536-16509535 Populus trichocarpa
Potri.018G145700 1.0kb downstream 1.0kb downstream 9068 true Chr18: 16509536-16518603 Populus trichocarpa
Potri.018G145700 1.0kb downstream 1.0kb downstream 1000 false Chr18: 16517604-16518603 Populus trichocarpa
Potri.018G145700 2.0kb upstream 2.0kb upstream 10068 true Chr18: 16507536-16517603 Populus trichocarpa
Potri.018G145700 2.0kb upstream 2.0kb upstream 2000 false Chr18: 16507536-16509535 Populus trichocarpa
Potri.018G145700 2.0kb downstream 2.0kb downstream 10068 true Chr18: 16509536-16519603 Populus trichocarpa
Potri.018G145700 2.0kb downstream 2.0kb downstream 2000 false Chr18: 16517604-16519603 Populus trichocarpa
Potri.018G145700 5.0kb upstream 5.0kb upstream 13068 true Chr18: 16504536-16517603 Populus trichocarpa
Potri.018G145700 5.0kb upstream 5.0kb upstream 5000 false Chr18: 16504536-16509535 Populus trichocarpa
Potri.018G145700 5.0kb downstream 5.0kb downstream 13068 true Chr18: 16509536-16522603 Populus trichocarpa
Potri.018G145700 5.0kb downstream 5.0kb downstream 5000 false Chr18: 16517604-16522603 Populus trichocarpa
Potri.018G145700 10.0kb upstream 10.0kb upstream 18068 true Chr18: 16499536-16517603 Populus trichocarpa
Potri.018G145700 10.0kb upstream 10.0kb upstream 10000 false Chr18: 16499536-16509535 Populus trichocarpa
Potri.018G145700 10.0kb downstream 10.0kb downstream 18068 true Chr18: 16509536-16527603 Populus trichocarpa
Potri.018G145700 10.0kb downstream 10.0kb downstream 10000 false Chr18: 16517604-16527603 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.067       High
cufflinks 0.001     Low  
cufflinks 0.005     Low  
cufflinks 0.001     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.003     Low  
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.163       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.032     Low  
cufflinks 0.002     Low  
cufflinks 0.001     Low  
cufflinks 0.012     Low  
cufflinks 0.001     Low  
cufflinks 0.001     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 2.338       High
cufflinks 0.007     Low  
cufflinks 0.331     Low  
cufflinks 0.238     Low  
cufflinks 0.152     Low  
cufflinks 0.181     Low  
cufflinks 0.196     Low  
cufflinks 0.454        

0 Strain