Gene : Potri.018G037900 P. trichocarpa v3.0
Defline:  (1 of 2) K11090 - lupus La protein (LA, SSB) Genomic Order:  379
Name:  ? Potri.018G037900 Secondary Identifier:  ? PAC:27009387
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.018G037900 0.5kb upstream 0.5kb upstream 5473 true Chr18: 3140453-3145925 Populus trichocarpa
Potri.018G037900 0.5kb upstream 0.5kb upstream 500 false Chr18: 3140453-3140952 Populus trichocarpa
Potri.018G037900 0.5kb downstream 0.5kb downstream 5473 true Chr18: 3140953-3146425 Populus trichocarpa
Potri.018G037900 0.5kb downstream 0.5kb downstream 500 false Chr18: 3145926-3146425 Populus trichocarpa
Potri.018G037900 1.0kb upstream 1.0kb upstream 5973 true Chr18: 3139953-3145925 Populus trichocarpa
Potri.018G037900 1.0kb upstream 1.0kb upstream 1000 false Chr18: 3139953-3140952 Populus trichocarpa
Potri.018G037900 1.0kb downstream 1.0kb downstream 5973 true Chr18: 3140953-3146925 Populus trichocarpa
Potri.018G037900 1.0kb downstream 1.0kb downstream 1000 false Chr18: 3145926-3146925 Populus trichocarpa
Potri.018G037900 2.0kb upstream 2.0kb upstream 6973 true Chr18: 3138953-3145925 Populus trichocarpa
Potri.018G037900 2.0kb upstream 2.0kb upstream 2000 false Chr18: 3138953-3140952 Populus trichocarpa
Potri.018G037900 2.0kb downstream 2.0kb downstream 6973 true Chr18: 3140953-3147925 Populus trichocarpa
Potri.018G037900 2.0kb downstream 2.0kb downstream 2000 false Chr18: 3145926-3147925 Populus trichocarpa
Potri.018G037900 5.0kb upstream 5.0kb upstream 9973 true Chr18: 3135953-3145925 Populus trichocarpa
Potri.018G037900 5.0kb upstream 5.0kb upstream 5000 false Chr18: 3135953-3140952 Populus trichocarpa
Potri.018G037900 5.0kb downstream 5.0kb downstream 9973 true Chr18: 3140953-3150925 Populus trichocarpa
Potri.018G037900 5.0kb downstream 5.0kb downstream 5000 false Chr18: 3145926-3150925 Populus trichocarpa
Potri.018G037900 10.0kb upstream 10.0kb upstream 14973 true Chr18: 3130953-3145925 Populus trichocarpa
Potri.018G037900 10.0kb upstream 10.0kb upstream 10000 false Chr18: 3130953-3140952 Populus trichocarpa
Potri.018G037900 10.0kb downstream 10.0kb downstream 14973 true Chr18: 3140953-3155925 Populus trichocarpa
Potri.018G037900 10.0kb downstream 10.0kb downstream 10000 false Chr18: 3145926-3155925 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.568        
cufflinks 1.411       Low
cufflinks 4.193        
cufflinks 1.844       Low
cufflinks 2.548        
cufflinks 3.656        
cufflinks 5.887        
cufflinks 5.275        
cufflinks 1.957       Low
cufflinks 4.46        
cufflinks 2.178       Low
cufflinks 5.688        
cufflinks 4.563        
cufflinks 2.079       Low
cufflinks 3.197        
cufflinks 5.27        
cufflinks 3.135        
cufflinks 4.073        
cufflinks 1.667       Low
cufflinks 4.961        
cufflinks 5.582        
cufflinks 13.773     High High
cufflinks 4.032        
cufflinks 5.104        
cufflinks 14.266        
cufflinks 18.628        
cufflinks 17.721        
cufflinks 17.773        
cufflinks 18.958        
cufflinks 16.306        

0 Strain