Gene : Potri.012G102400 P. trichocarpa v3.0
Defline:  (1 of 3) PTHR11177//PTHR11177:SF186 - CHITINASE // SUBFAMILY NOT NAMED Genomic Order:  1024
Name:  ? Potri.012G102400 Secondary Identifier:  ? PAC:27048987
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6902 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.012G102400 0.5kb upstream 0.5kb upstream 1742 true Chr12: 12699642-12701383 Populus trichocarpa
Potri.012G102400 0.5kb upstream 0.5kb upstream 500 false Chr12: 12699642-12700141 Populus trichocarpa
Potri.012G102400 0.5kb downstream 0.5kb downstream 1742 true Chr12: 12700142-12701883 Populus trichocarpa
Potri.012G102400 0.5kb downstream 0.5kb downstream 500 false Chr12: 12701384-12701883 Populus trichocarpa
Potri.012G102400 1.0kb upstream 1.0kb upstream 2242 true Chr12: 12699142-12701383 Populus trichocarpa
Potri.012G102400 1.0kb upstream 1.0kb upstream 1000 false Chr12: 12699142-12700141 Populus trichocarpa
Potri.012G102400 1.0kb downstream 1.0kb downstream 2242 true Chr12: 12700142-12702383 Populus trichocarpa
Potri.012G102400 1.0kb downstream 1.0kb downstream 1000 false Chr12: 12701384-12702383 Populus trichocarpa
Potri.012G102400 2.0kb upstream 2.0kb upstream 3242 true Chr12: 12698142-12701383 Populus trichocarpa
Potri.012G102400 2.0kb upstream 2.0kb upstream 2000 false Chr12: 12698142-12700141 Populus trichocarpa
Potri.012G102400 2.0kb downstream 2.0kb downstream 3242 true Chr12: 12700142-12703383 Populus trichocarpa
Potri.012G102400 2.0kb downstream 2.0kb downstream 2000 false Chr12: 12701384-12703383 Populus trichocarpa
Potri.012G102400 5.0kb upstream 5.0kb upstream 6242 true Chr12: 12695142-12701383 Populus trichocarpa
Potri.012G102400 5.0kb upstream 5.0kb upstream 5000 false Chr12: 12695142-12700141 Populus trichocarpa
Potri.012G102400 5.0kb downstream 5.0kb downstream 6242 true Chr12: 12700142-12706383 Populus trichocarpa
Potri.012G102400 5.0kb downstream 5.0kb downstream 5000 false Chr12: 12701384-12706383 Populus trichocarpa
Potri.012G102400 10.0kb upstream 10.0kb upstream 11242 true Chr12: 12690142-12701383 Populus trichocarpa
Potri.012G102400 10.0kb upstream 10.0kb upstream 10000 false Chr12: 12690142-12700141 Populus trichocarpa
Potri.012G102400 10.0kb downstream 10.0kb downstream 11242 true Chr12: 12700142-12711383 Populus trichocarpa
Potri.012G102400 10.0kb downstream 10.0kb downstream 10000 false Chr12: 12701384-12711383 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.236     High High
cufflinks 2.332        
cufflinks 1.358        
cufflinks 2.515        
cufflinks 2.947        
cufflinks 2.797        
cufflinks 1.183        
cufflinks 0.812       Low
cufflinks 3.091        
cufflinks 2.148        
cufflinks 2.294        
cufflinks 7.276       High
cufflinks 3.28        
cufflinks 1.09       Low
cufflinks 0.898       Low
cufflinks 2.233        
cufflinks 1.661        
cufflinks 3.044        
cufflinks 1.333        
cufflinks 1.047       Low
cufflinks 2.879        
cufflinks 3.276        
cufflinks 1.522        
cufflinks 1.384        
cufflinks 0.741        
cufflinks 1.185        
cufflinks 0.67        
cufflinks 2.061       High
cufflinks 2.103       High
cufflinks 0.652        

0 Strain