Gene : Potri.018G110000 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR20902//PTHR20902:SF0 - 41-2 PROTEIN ANTIGEN-RELATED // TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 5 Genomic Order:  1100
Name:  ? Potri.018G110000 Secondary Identifier:  ? PAC:27010290
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.018G110000 0.5kb upstream 0.5kb upstream 4876 true Chr18: 13624573-13629448 Populus trichocarpa
Potri.018G110000 0.5kb upstream 0.5kb upstream 500 false Chr18: 13628949-13629448 Populus trichocarpa
Potri.018G110000 0.5kb downstream 0.5kb downstream 4876 true Chr18: 13624073-13628948 Populus trichocarpa
Potri.018G110000 0.5kb downstream 0.5kb downstream 500 false Chr18: 13624073-13624572 Populus trichocarpa
Potri.018G110000 1.0kb upstream 1.0kb upstream 5376 true Chr18: 13624573-13629948 Populus trichocarpa
Potri.018G110000 1.0kb upstream 1.0kb upstream 1000 false Chr18: 13628949-13629948 Populus trichocarpa
Potri.018G110000 1.0kb downstream 1.0kb downstream 5376 true Chr18: 13623573-13628948 Populus trichocarpa
Potri.018G110000 1.0kb downstream 1.0kb downstream 1000 false Chr18: 13623573-13624572 Populus trichocarpa
Potri.018G110000 2.0kb upstream 2.0kb upstream 6376 true Chr18: 13624573-13630948 Populus trichocarpa
Potri.018G110000 2.0kb upstream 2.0kb upstream 2000 false Chr18: 13628949-13630948 Populus trichocarpa
Potri.018G110000 2.0kb downstream 2.0kb downstream 6376 true Chr18: 13622573-13628948 Populus trichocarpa
Potri.018G110000 2.0kb downstream 2.0kb downstream 2000 false Chr18: 13622573-13624572 Populus trichocarpa
Potri.018G110000 5.0kb upstream 5.0kb upstream 9376 true Chr18: 13624573-13633948 Populus trichocarpa
Potri.018G110000 5.0kb upstream 5.0kb upstream 5000 false Chr18: 13628949-13633948 Populus trichocarpa
Potri.018G110000 5.0kb downstream 5.0kb downstream 9376 true Chr18: 13619573-13628948 Populus trichocarpa
Potri.018G110000 5.0kb downstream 5.0kb downstream 5000 false Chr18: 13619573-13624572 Populus trichocarpa
Potri.018G110000 10.0kb upstream 10.0kb upstream 14376 true Chr18: 13624573-13638948 Populus trichocarpa
Potri.018G110000 10.0kb upstream 10.0kb upstream 10000 false Chr18: 13628949-13638948 Populus trichocarpa
Potri.018G110000 10.0kb downstream 10.0kb downstream 14376 true Chr18: 13614573-13628948 Populus trichocarpa
Potri.018G110000 10.0kb downstream 10.0kb downstream 10000 false Chr18: 13614573-13624572 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.595       High
cufflinks 2.451        
cufflinks 2.037       Low
cufflinks 1.746       Low
cufflinks 3.78       High
cufflinks 3.248        
cufflinks 3.123        
cufflinks 3.561       High
cufflinks 2.646        
cufflinks 2.712        
cufflinks 2.949        
cufflinks 2.527        
cufflinks 2.446        
cufflinks 2.452        
cufflinks 3.237        
cufflinks 2.321        
cufflinks 3.642       High
cufflinks 2.548        
cufflinks 2.479        
cufflinks 2.979        
cufflinks 3.03        
cufflinks 2.51        
cufflinks 3.377        
cufflinks 2.856        
cufflinks 19.263        
cufflinks 15.49        
cufflinks 18.361        
cufflinks 22.146       High
cufflinks 27.442       High
cufflinks 14.741        

0 Strain