Gene : Potri.019G071700 P. trichocarpa v3.0
Defline:  (1 of 2) 1.1.1.3//2.7.2.4 - Homoserine dehydrogenase // Aspartate kinase / Aspartokinase Genomic Order:  717
Name:  ? Potri.019G071700 Secondary Identifier:  ? PAC:27025296
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa HOMOSERSYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-3001 Populus trichocarpa pathologic  
Ptrichocarpa PWY-724 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5097 Populus trichocarpa pathologic  
Ptrichocarpa THRESYN-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.019G071700 0.5kb upstream 0.5kb upstream 10035 true Chr19: 10575487-10585521 Populus trichocarpa
Potri.019G071700 0.5kb upstream 0.5kb upstream 500 false Chr19: 10575487-10575986 Populus trichocarpa
Potri.019G071700 0.5kb downstream 0.5kb downstream 10035 true Chr19: 10575987-10586021 Populus trichocarpa
Potri.019G071700 0.5kb downstream 0.5kb downstream 500 false Chr19: 10585522-10586021 Populus trichocarpa
Potri.019G071700 1.0kb upstream 1.0kb upstream 10535 true Chr19: 10574987-10585521 Populus trichocarpa
Potri.019G071700 1.0kb upstream 1.0kb upstream 1000 false Chr19: 10574987-10575986 Populus trichocarpa
Potri.019G071700 1.0kb downstream 1.0kb downstream 10535 true Chr19: 10575987-10586521 Populus trichocarpa
Potri.019G071700 1.0kb downstream 1.0kb downstream 1000 false Chr19: 10585522-10586521 Populus trichocarpa
Potri.019G071700 2.0kb upstream 2.0kb upstream 11535 true Chr19: 10573987-10585521 Populus trichocarpa
Potri.019G071700 2.0kb upstream 2.0kb upstream 2000 false Chr19: 10573987-10575986 Populus trichocarpa
Potri.019G071700 2.0kb downstream 2.0kb downstream 11535 true Chr19: 10575987-10587521 Populus trichocarpa
Potri.019G071700 2.0kb downstream 2.0kb downstream 2000 false Chr19: 10585522-10587521 Populus trichocarpa
Potri.019G071700 5.0kb upstream 5.0kb upstream 14535 true Chr19: 10570987-10585521 Populus trichocarpa
Potri.019G071700 5.0kb upstream 5.0kb upstream 5000 false Chr19: 10570987-10575986 Populus trichocarpa
Potri.019G071700 5.0kb downstream 5.0kb downstream 14535 true Chr19: 10575987-10590521 Populus trichocarpa
Potri.019G071700 5.0kb downstream 5.0kb downstream 5000 false Chr19: 10585522-10590521 Populus trichocarpa
Potri.019G071700 10.0kb upstream 10.0kb upstream 19535 true Chr19: 10565987-10585521 Populus trichocarpa
Potri.019G071700 10.0kb upstream 10.0kb upstream 10000 false Chr19: 10565987-10575986 Populus trichocarpa
Potri.019G071700 10.0kb downstream 10.0kb downstream 19535 true Chr19: 10575987-10595521 Populus trichocarpa
Potri.019G071700 10.0kb downstream 10.0kb downstream 10000 false Chr19: 10585522-10595521 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.542        
cufflinks 5.782        
cufflinks 8.147       High
cufflinks 4.083        
cufflinks 7.851       High
cufflinks 5.851        
cufflinks 5.844        
cufflinks 3.227       Low
cufflinks 4.651        
cufflinks 4.978        
cufflinks 6.178        
cufflinks 7.14       High
cufflinks 5.255        
cufflinks 3.762       Low
cufflinks 4.379        
cufflinks 2.654       Low
cufflinks 5.514        
cufflinks 3.702       Low
cufflinks 7.826       High
cufflinks 5.682        
cufflinks 5.68        
cufflinks 6.475        
cufflinks 4.723        
cufflinks 8.056       High
cufflinks 14.293        
cufflinks 14.613        
cufflinks 13.754        
cufflinks 19.391        
cufflinks 23.895        
cufflinks 20.435        

0 Strain