Gene : Potri.019G018400 P. trichocarpa v3.0
Defline:  (1 of 2) K12860 - pre-mRNA-splicing factor CDC5/CEF1 (CDC5L, CDC5, CEF1) Genomic Order:  184
Name:  ? Potri.019G018400 Secondary Identifier:  ? PAC:27025096
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.019G018400 0.5kb upstream 0.5kb upstream 8021 true Chr19: 2144935-2152955 Populus trichocarpa
Potri.019G018400 0.5kb upstream 0.5kb upstream 500 false Chr19: 2144935-2145434 Populus trichocarpa
Potri.019G018400 0.5kb downstream 0.5kb downstream 8021 true Chr19: 2145435-2153455 Populus trichocarpa
Potri.019G018400 0.5kb downstream 0.5kb downstream 500 false Chr19: 2152956-2153455 Populus trichocarpa
Potri.019G018400 1.0kb upstream 1.0kb upstream 8521 true Chr19: 2144435-2152955 Populus trichocarpa
Potri.019G018400 1.0kb upstream 1.0kb upstream 1000 false Chr19: 2144435-2145434 Populus trichocarpa
Potri.019G018400 1.0kb downstream 1.0kb downstream 8521 true Chr19: 2145435-2153955 Populus trichocarpa
Potri.019G018400 1.0kb downstream 1.0kb downstream 1000 false Chr19: 2152956-2153955 Populus trichocarpa
Potri.019G018400 2.0kb upstream 2.0kb upstream 9521 true Chr19: 2143435-2152955 Populus trichocarpa
Potri.019G018400 2.0kb upstream 2.0kb upstream 2000 false Chr19: 2143435-2145434 Populus trichocarpa
Potri.019G018400 2.0kb downstream 2.0kb downstream 9521 true Chr19: 2145435-2154955 Populus trichocarpa
Potri.019G018400 2.0kb downstream 2.0kb downstream 2000 false Chr19: 2152956-2154955 Populus trichocarpa
Potri.019G018400 5.0kb upstream 5.0kb upstream 12521 true Chr19: 2140435-2152955 Populus trichocarpa
Potri.019G018400 5.0kb upstream 5.0kb upstream 5000 false Chr19: 2140435-2145434 Populus trichocarpa
Potri.019G018400 5.0kb downstream 5.0kb downstream 12521 true Chr19: 2145435-2157955 Populus trichocarpa
Potri.019G018400 5.0kb downstream 5.0kb downstream 5000 false Chr19: 2152956-2157955 Populus trichocarpa
Potri.019G018400 10.0kb upstream 10.0kb upstream 17521 true Chr19: 2135435-2152955 Populus trichocarpa
Potri.019G018400 10.0kb upstream 10.0kb upstream 10000 false Chr19: 2135435-2145434 Populus trichocarpa
Potri.019G018400 10.0kb downstream 10.0kb downstream 17521 true Chr19: 2145435-2162955 Populus trichocarpa
Potri.019G018400 10.0kb downstream 10.0kb downstream 10000 false Chr19: 2152956-2162955 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.584        
cufflinks 3.916        
cufflinks 4.127        
cufflinks 2.66        
cufflinks 3.961        
cufflinks 5.067       High
cufflinks 1.692       Low
cufflinks 3.798        
cufflinks 2.418       Low
cufflinks 4.001        
cufflinks 2.925        
cufflinks 4.7       High
cufflinks 3.481        
cufflinks 2.136       Low
cufflinks 3.639        
cufflinks 2.211       Low
cufflinks 2.966        
cufflinks 5.405       High
cufflinks 5.465       High
cufflinks 3.498        
cufflinks 3.418        
cufflinks 4.425        
cufflinks 3.48        
cufflinks 3.817        
cufflinks 23.716       Low
cufflinks 31.864     High High
cufflinks 29.2     High  
cufflinks 30.209     High  
cufflinks 26.459        
cufflinks 30.063     High  

0 Strain