Gene : Potri.019G057200 P. trichocarpa v3.0
Defline:  (1 of 2) 2.4.2.17 - ATP phosphoribosyltransferase / Phosphoribosyl-ATP pyrophosphorylase Genomic Order:  572
Name:  ? Potri.019G057200 Secondary Identifier:  ? PAC:27026609
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa HISTSYN-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.019G057200 0.5kb upstream 0.5kb upstream 10814 true Chr19: 8868770-8879583 Populus trichocarpa
Potri.019G057200 0.5kb upstream 0.5kb upstream 500 false Chr19: 8879084-8879583 Populus trichocarpa
Potri.019G057200 0.5kb downstream 0.5kb downstream 10814 true Chr19: 8868270-8879083 Populus trichocarpa
Potri.019G057200 0.5kb downstream 0.5kb downstream 500 false Chr19: 8868270-8868769 Populus trichocarpa
Potri.019G057200 1.0kb upstream 1.0kb upstream 11314 true Chr19: 8868770-8880083 Populus trichocarpa
Potri.019G057200 1.0kb upstream 1.0kb upstream 1000 false Chr19: 8879084-8880083 Populus trichocarpa
Potri.019G057200 1.0kb downstream 1.0kb downstream 11314 true Chr19: 8867770-8879083 Populus trichocarpa
Potri.019G057200 1.0kb downstream 1.0kb downstream 1000 false Chr19: 8867770-8868769 Populus trichocarpa
Potri.019G057200 2.0kb upstream 2.0kb upstream 12314 true Chr19: 8868770-8881083 Populus trichocarpa
Potri.019G057200 2.0kb upstream 2.0kb upstream 2000 false Chr19: 8879084-8881083 Populus trichocarpa
Potri.019G057200 2.0kb downstream 2.0kb downstream 12314 true Chr19: 8866770-8879083 Populus trichocarpa
Potri.019G057200 2.0kb downstream 2.0kb downstream 2000 false Chr19: 8866770-8868769 Populus trichocarpa
Potri.019G057200 5.0kb upstream 5.0kb upstream 15314 true Chr19: 8868770-8884083 Populus trichocarpa
Potri.019G057200 5.0kb upstream 5.0kb upstream 5000 false Chr19: 8879084-8884083 Populus trichocarpa
Potri.019G057200 5.0kb downstream 5.0kb downstream 15314 true Chr19: 8863770-8879083 Populus trichocarpa
Potri.019G057200 5.0kb downstream 5.0kb downstream 5000 false Chr19: 8863770-8868769 Populus trichocarpa
Potri.019G057200 10.0kb upstream 10.0kb upstream 20314 true Chr19: 8868770-8889083 Populus trichocarpa
Potri.019G057200 10.0kb upstream 10.0kb upstream 10000 false Chr19: 8879084-8889083 Populus trichocarpa
Potri.019G057200 10.0kb downstream 10.0kb downstream 20314 true Chr19: 8858770-8879083 Populus trichocarpa
Potri.019G057200 10.0kb downstream 10.0kb downstream 10000 false Chr19: 8858770-8868769 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.802        
cufflinks 2.504        
cufflinks 12.568     High High
cufflinks 2.593        
cufflinks 4.589        
cufflinks 3.683        
cufflinks 5.669        
cufflinks 3.515        
cufflinks 5.436        
cufflinks 6.491       High
cufflinks 4.844        
cufflinks 4.292        
cufflinks 6.07        
cufflinks 1.988       Low
cufflinks 5.44        
cufflinks 3.553        
cufflinks 2.364       Low
cufflinks 1.548       Low
cufflinks 2.121       Low
cufflinks 3.258        
cufflinks 5.009        
cufflinks 2.845        
cufflinks 3.345        
cufflinks 4.581        
cufflinks 12.649        
cufflinks 10.466        
cufflinks 9.926        
cufflinks 12.404        
cufflinks 16.043        
cufflinks 10.464        

0 Strain