Gene : Potri.019G104700 P. trichocarpa v3.0
Defline:  (1 of 3) 2.1.2.5 - Glutamate formimidoyltransferase / Glutamate formyltransferase Genomic Order:  1047
Name:  ? Potri.019G104700 Secondary Identifier:  ? PAC:27026271
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-3841 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.019G104700 0.5kb upstream 0.5kb upstream 4121 true Chr19: 13333226-13337346 Populus trichocarpa
Potri.019G104700 0.5kb upstream 0.5kb upstream 500 false Chr19: 13336847-13337346 Populus trichocarpa
Potri.019G104700 0.5kb downstream 0.5kb downstream 4121 true Chr19: 13332726-13336846 Populus trichocarpa
Potri.019G104700 0.5kb downstream 0.5kb downstream 500 false Chr19: 13332726-13333225 Populus trichocarpa
Potri.019G104700 1.0kb upstream 1.0kb upstream 4621 true Chr19: 13333226-13337846 Populus trichocarpa
Potri.019G104700 1.0kb upstream 1.0kb upstream 1000 false Chr19: 13336847-13337846 Populus trichocarpa
Potri.019G104700 1.0kb downstream 1.0kb downstream 4621 true Chr19: 13332226-13336846 Populus trichocarpa
Potri.019G104700 1.0kb downstream 1.0kb downstream 1000 false Chr19: 13332226-13333225 Populus trichocarpa
Potri.019G104700 2.0kb upstream 2.0kb upstream 5621 true Chr19: 13333226-13338846 Populus trichocarpa
Potri.019G104700 2.0kb upstream 2.0kb upstream 2000 false Chr19: 13336847-13338846 Populus trichocarpa
Potri.019G104700 2.0kb downstream 2.0kb downstream 5621 true Chr19: 13331226-13336846 Populus trichocarpa
Potri.019G104700 2.0kb downstream 2.0kb downstream 2000 false Chr19: 13331226-13333225 Populus trichocarpa
Potri.019G104700 5.0kb upstream 5.0kb upstream 8621 true Chr19: 13333226-13341846 Populus trichocarpa
Potri.019G104700 5.0kb upstream 5.0kb upstream 5000 false Chr19: 13336847-13341846 Populus trichocarpa
Potri.019G104700 5.0kb downstream 5.0kb downstream 8621 true Chr19: 13328226-13336846 Populus trichocarpa
Potri.019G104700 5.0kb downstream 5.0kb downstream 5000 false Chr19: 13328226-13333225 Populus trichocarpa
Potri.019G104700 10.0kb upstream 10.0kb upstream 13621 true Chr19: 13333226-13346846 Populus trichocarpa
Potri.019G104700 10.0kb upstream 10.0kb upstream 10000 false Chr19: 13336847-13346846 Populus trichocarpa
Potri.019G104700 10.0kb downstream 10.0kb downstream 13621 true Chr19: 13323226-13336846 Populus trichocarpa
Potri.019G104700 10.0kb downstream 10.0kb downstream 10000 false Chr19: 13323226-13333225 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.146       High
cufflinks 12.129     High  
cufflinks 7.107        
cufflinks 2.491        
cufflinks 0.094     Low Low
cufflinks 5.993        
cufflinks 8.947     High  
cufflinks 4.771        
cufflinks 5.507        
cufflinks 4.635        
cufflinks 16.105     High High
cufflinks 5.069        
cufflinks 13.316     High  
cufflinks 4.666        
cufflinks 8.735     High  
cufflinks 6.062        
cufflinks 4.698        
cufflinks 5.489        
cufflinks 13.985     High  
cufflinks 4.879        
cufflinks 9.535     High  
cufflinks 5.062        
cufflinks 1.737       Low
cufflinks 10.159     High  
cufflinks 2.087        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.058     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.085     Low  

0 Strain