Gene : Potri.019G087400 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR12161//PTHR12161:SF21 - UNCHARACTERIZED DUF292 // REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN Genomic Order:  874
Name:  ? Potri.019G087400 Secondary Identifier:  ? PAC:27025860
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.019G087400 0.5kb upstream 0.5kb upstream 5347 true Chr19: 11926293-11931639 Populus trichocarpa
Potri.019G087400 0.5kb upstream 0.5kb upstream 500 false Chr19: 11926293-11926792 Populus trichocarpa
Potri.019G087400 0.5kb downstream 0.5kb downstream 5347 true Chr19: 11926793-11932139 Populus trichocarpa
Potri.019G087400 0.5kb downstream 0.5kb downstream 500 false Chr19: 11931640-11932139 Populus trichocarpa
Potri.019G087400 1.0kb upstream 1.0kb upstream 5847 true Chr19: 11925793-11931639 Populus trichocarpa
Potri.019G087400 1.0kb upstream 1.0kb upstream 1000 false Chr19: 11925793-11926792 Populus trichocarpa
Potri.019G087400 1.0kb downstream 1.0kb downstream 5847 true Chr19: 11926793-11932639 Populus trichocarpa
Potri.019G087400 1.0kb downstream 1.0kb downstream 1000 false Chr19: 11931640-11932639 Populus trichocarpa
Potri.019G087400 2.0kb upstream 2.0kb upstream 6847 true Chr19: 11924793-11931639 Populus trichocarpa
Potri.019G087400 2.0kb upstream 2.0kb upstream 2000 false Chr19: 11924793-11926792 Populus trichocarpa
Potri.019G087400 2.0kb downstream 2.0kb downstream 6847 true Chr19: 11926793-11933639 Populus trichocarpa
Potri.019G087400 2.0kb downstream 2.0kb downstream 2000 false Chr19: 11931640-11933639 Populus trichocarpa
Potri.019G087400 5.0kb upstream 5.0kb upstream 9847 true Chr19: 11921793-11931639 Populus trichocarpa
Potri.019G087400 5.0kb upstream 5.0kb upstream 5000 false Chr19: 11921793-11926792 Populus trichocarpa
Potri.019G087400 5.0kb downstream 5.0kb downstream 9847 true Chr19: 11926793-11936639 Populus trichocarpa
Potri.019G087400 5.0kb downstream 5.0kb downstream 5000 false Chr19: 11931640-11936639 Populus trichocarpa
Potri.019G087400 10.0kb upstream 10.0kb upstream 14847 true Chr19: 11916793-11931639 Populus trichocarpa
Potri.019G087400 10.0kb upstream 10.0kb upstream 10000 false Chr19: 11916793-11926792 Populus trichocarpa
Potri.019G087400 10.0kb downstream 10.0kb downstream 14847 true Chr19: 11926793-11941639 Populus trichocarpa
Potri.019G087400 10.0kb downstream 10.0kb downstream 10000 false Chr19: 11931640-11941639 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.204        
cufflinks 0.347        
cufflinks 1.267       High
cufflinks 1.851       High
cufflinks 0.399        
cufflinks 0.539        
cufflinks 0.942        
cufflinks 0.621        
cufflinks 0.665        
cufflinks 0.713        
cufflinks 1.783       High
cufflinks 0.426        
cufflinks 0.262       Low
cufflinks 0.375        
cufflinks 1.062        
cufflinks 0.401        
cufflinks 1.244       High
cufflinks 0.574        
cufflinks 0.707        
cufflinks 0.476        
cufflinks 0.32        
cufflinks 1.326       High
cufflinks 0.348        
cufflinks 0.097     Low Low
cufflinks 1.968        
cufflinks 3.201       High
cufflinks 2.775        
cufflinks 1.819        
cufflinks 2.425        
cufflinks 2.459        

0 Strain