Gene : Potri.001G187900 P. trichocarpa v3.0
Defline:  (1 of 4) PTHR13301//PTHR13301:SF28 - X-BOX TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1879
Name:  ? Potri.001G187900 Secondary Identifier:  ? PAC:27048241
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-1001 Populus trichocarpa pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G187900 0.5kb upstream 0.5kb upstream 719 true Chr01: 16596877-16597595 Populus trichocarpa
Potri.001G187900 0.5kb upstream 0.5kb upstream 500 false Chr01: 16597096-16597595 Populus trichocarpa
Potri.001G187900 0.5kb downstream 0.5kb downstream 719 true Chr01: 16596377-16597095 Populus trichocarpa
Potri.001G187900 0.5kb downstream 0.5kb downstream 500 false Chr01: 16596377-16596876 Populus trichocarpa
Potri.001G187900 1.0kb upstream 1.0kb upstream 1219 true Chr01: 16596877-16598095 Populus trichocarpa
Potri.001G187900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 16597096-16598095 Populus trichocarpa
Potri.001G187900 1.0kb downstream 1.0kb downstream 1219 true Chr01: 16595877-16597095 Populus trichocarpa
Potri.001G187900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 16595877-16596876 Populus trichocarpa
Potri.001G187900 2.0kb upstream 2.0kb upstream 2219 true Chr01: 16596877-16599095 Populus trichocarpa
Potri.001G187900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 16597096-16599095 Populus trichocarpa
Potri.001G187900 2.0kb downstream 2.0kb downstream 2219 true Chr01: 16594877-16597095 Populus trichocarpa
Potri.001G187900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 16594877-16596876 Populus trichocarpa
Potri.001G187900 5.0kb upstream 5.0kb upstream 5219 true Chr01: 16596877-16602095 Populus trichocarpa
Potri.001G187900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 16597096-16602095 Populus trichocarpa
Potri.001G187900 5.0kb downstream 5.0kb downstream 5219 true Chr01: 16591877-16597095 Populus trichocarpa
Potri.001G187900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 16591877-16596876 Populus trichocarpa
Potri.001G187900 10.0kb upstream 10.0kb upstream 10219 true Chr01: 16596877-16607095 Populus trichocarpa
Potri.001G187900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 16597096-16607095 Populus trichocarpa
Potri.001G187900 10.0kb downstream 10.0kb downstream 10219 true Chr01: 16586877-16597095 Populus trichocarpa
Potri.001G187900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 16586877-16596876 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.07     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.117     Low  
cufflinks 0.075     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.246       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.129     Low  
cufflinks 0.092     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain