Gene : Potri.001G281000 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR31165:SF6 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 Genomic Order:  2810
Name:  ? Potri.001G281000 Secondary Identifier:  ? PAC:27047599
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G281000 0.5kb upstream 0.5kb upstream 1551 true Chr01: 28761516-28763066 Populus trichocarpa
Potri.001G281000 0.5kb upstream 0.5kb upstream 500 false Chr01: 28761516-28762015 Populus trichocarpa
Potri.001G281000 0.5kb downstream 0.5kb downstream 1551 true Chr01: 28762016-28763566 Populus trichocarpa
Potri.001G281000 0.5kb downstream 0.5kb downstream 500 false Chr01: 28763067-28763566 Populus trichocarpa
Potri.001G281000 1.0kb upstream 1.0kb upstream 2051 true Chr01: 28761016-28763066 Populus trichocarpa
Potri.001G281000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 28761016-28762015 Populus trichocarpa
Potri.001G281000 1.0kb downstream 1.0kb downstream 2051 true Chr01: 28762016-28764066 Populus trichocarpa
Potri.001G281000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 28763067-28764066 Populus trichocarpa
Potri.001G281000 2.0kb upstream 2.0kb upstream 3051 true Chr01: 28760016-28763066 Populus trichocarpa
Potri.001G281000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 28760016-28762015 Populus trichocarpa
Potri.001G281000 2.0kb downstream 2.0kb downstream 3051 true Chr01: 28762016-28765066 Populus trichocarpa
Potri.001G281000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 28763067-28765066 Populus trichocarpa
Potri.001G281000 5.0kb upstream 5.0kb upstream 6051 true Chr01: 28757016-28763066 Populus trichocarpa
Potri.001G281000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 28757016-28762015 Populus trichocarpa
Potri.001G281000 5.0kb downstream 5.0kb downstream 6051 true Chr01: 28762016-28768066 Populus trichocarpa
Potri.001G281000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 28763067-28768066 Populus trichocarpa
Potri.001G281000 10.0kb upstream 10.0kb upstream 11051 true Chr01: 28752016-28763066 Populus trichocarpa
Potri.001G281000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 28752016-28762015 Populus trichocarpa
Potri.001G281000 10.0kb downstream 10.0kb downstream 11051 true Chr01: 28762016-28773066 Populus trichocarpa
Potri.001G281000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 28763067-28773066 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.114        
cufflinks 1.822        
cufflinks 2.955        
cufflinks 1.401       Low
cufflinks 4.126        
cufflinks 0.968       Low
cufflinks 3.379        
cufflinks 4.837       High
cufflinks 1.354       Low
cufflinks 2.653        
cufflinks 2.775        
cufflinks 2.549        
cufflinks 2.162        
cufflinks 0.799       Low
cufflinks 2.613        
cufflinks 2.003        
cufflinks 1.883        
cufflinks 2.973        
cufflinks 2.853        
cufflinks 1.803        
cufflinks 6.084       High
cufflinks 2.051        
cufflinks 8.176     High High
cufflinks 6.024       High
cufflinks 5.068        
cufflinks 3.96        
cufflinks 3.667        
cufflinks 6.062        
cufflinks 9.011       High
cufflinks 3.404        

0 Strain