Gene : Potri.001G284300 P. trichocarpa v3.0
Defline:  (1 of 3) PTHR11945//PTHR11945:SF147 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL16-RELATED Genomic Order:  2843
Name:  ? Potri.001G284300 Secondary Identifier:  ? PAC:27041297
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G284300 0.5kb upstream 0.5kb upstream 680 true Chr01: 29092097-29092776 Populus trichocarpa
Potri.001G284300 0.5kb upstream 0.5kb upstream 500 false Chr01: 29092097-29092596 Populus trichocarpa
Potri.001G284300 0.5kb downstream 0.5kb downstream 680 true Chr01: 29092597-29093276 Populus trichocarpa
Potri.001G284300 0.5kb downstream 0.5kb downstream 500 false Chr01: 29092777-29093276 Populus trichocarpa
Potri.001G284300 1.0kb upstream 1.0kb upstream 1180 true Chr01: 29091597-29092776 Populus trichocarpa
Potri.001G284300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 29091597-29092596 Populus trichocarpa
Potri.001G284300 1.0kb downstream 1.0kb downstream 1180 true Chr01: 29092597-29093776 Populus trichocarpa
Potri.001G284300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 29092777-29093776 Populus trichocarpa
Potri.001G284300 2.0kb upstream 2.0kb upstream 2180 true Chr01: 29090597-29092776 Populus trichocarpa
Potri.001G284300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 29090597-29092596 Populus trichocarpa
Potri.001G284300 2.0kb downstream 2.0kb downstream 2180 true Chr01: 29092597-29094776 Populus trichocarpa
Potri.001G284300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 29092777-29094776 Populus trichocarpa
Potri.001G284300 5.0kb upstream 5.0kb upstream 5180 true Chr01: 29087597-29092776 Populus trichocarpa
Potri.001G284300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 29087597-29092596 Populus trichocarpa
Potri.001G284300 5.0kb downstream 5.0kb downstream 5180 true Chr01: 29092597-29097776 Populus trichocarpa
Potri.001G284300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 29092777-29097776 Populus trichocarpa
Potri.001G284300 10.0kb upstream 10.0kb upstream 10180 true Chr01: 29082597-29092776 Populus trichocarpa
Potri.001G284300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 29082597-29092596 Populus trichocarpa
Potri.001G284300 10.0kb downstream 10.0kb downstream 10180 true Chr01: 29092597-29102776 Populus trichocarpa
Potri.001G284300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 29092777-29102776 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.499        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.174     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.114     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.125     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 46.584     High High
cufflinks 1.922        
cufflinks 0.185        
cufflinks 0.881        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.804        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.039     Low Low
cufflinks 0.069     Low  
cufflinks 2.62        
cufflinks 2.543        
cufflinks 2.085        
cufflinks 4.432       High
cufflinks 2.924        
cufflinks 1.788        

0 Strain