Gene : Potri.016G128100 P. trichocarpa v3.0
Defline:  (1 of 3) PTHR10108//PTHR10108:SF885 - METHYLTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  1281
Name:  ? Potri.016G128100 Secondary Identifier:  ? PAC:27013192
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-2541 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G128100 0.5kb upstream 0.5kb upstream 2051 true Chr16: 13079974-13082024 Populus trichocarpa
Potri.016G128100 0.5kb upstream 0.5kb upstream 500 false Chr16: 13081525-13082024 Populus trichocarpa
Potri.016G128100 0.5kb downstream 0.5kb downstream 2051 true Chr16: 13079474-13081524 Populus trichocarpa
Potri.016G128100 0.5kb downstream 0.5kb downstream 500 false Chr16: 13079474-13079973 Populus trichocarpa
Potri.016G128100 1.0kb upstream 1.0kb upstream 2551 true Chr16: 13079974-13082524 Populus trichocarpa
Potri.016G128100 1.0kb upstream 1.0kb upstream 1000 false Chr16: 13081525-13082524 Populus trichocarpa
Potri.016G128100 1.0kb downstream 1.0kb downstream 2551 true Chr16: 13078974-13081524 Populus trichocarpa
Potri.016G128100 1.0kb downstream 1.0kb downstream 1000 false Chr16: 13078974-13079973 Populus trichocarpa
Potri.016G128100 2.0kb upstream 2.0kb upstream 3551 true Chr16: 13079974-13083524 Populus trichocarpa
Potri.016G128100 2.0kb upstream 2.0kb upstream 2000 false Chr16: 13081525-13083524 Populus trichocarpa
Potri.016G128100 2.0kb downstream 2.0kb downstream 3551 true Chr16: 13077974-13081524 Populus trichocarpa
Potri.016G128100 2.0kb downstream 2.0kb downstream 2000 false Chr16: 13077974-13079973 Populus trichocarpa
Potri.016G128100 5.0kb upstream 5.0kb upstream 6551 true Chr16: 13079974-13086524 Populus trichocarpa
Potri.016G128100 5.0kb upstream 5.0kb upstream 5000 false Chr16: 13081525-13086524 Populus trichocarpa
Potri.016G128100 5.0kb downstream 5.0kb downstream 6551 true Chr16: 13074974-13081524 Populus trichocarpa
Potri.016G128100 5.0kb downstream 5.0kb downstream 5000 false Chr16: 13074974-13079973 Populus trichocarpa
Potri.016G128100 10.0kb upstream 10.0kb upstream 11551 true Chr16: 13079974-13091524 Populus trichocarpa
Potri.016G128100 10.0kb upstream 10.0kb upstream 10000 false Chr16: 13081525-13091524 Populus trichocarpa
Potri.016G128100 10.0kb downstream 10.0kb downstream 11551 true Chr16: 13069974-13081524 Populus trichocarpa
Potri.016G128100 10.0kb downstream 10.0kb downstream 10000 false Chr16: 13069974-13079973 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.802     High High
cufflinks 26.931     High High
cufflinks 6.227       Low
cufflinks 4.86       Low
cufflinks 16.387     High  
cufflinks 7.722       Low
cufflinks 14.355     High  
cufflinks 14.643     High  
cufflinks 21.52     High  
cufflinks 10.633     High  
cufflinks 18.325     High  
cufflinks 19.569     High  
cufflinks 9.176     High Low
cufflinks 22.68     High  
cufflinks 17.816     High  
cufflinks 15.914     High  
cufflinks 10.376     High  
cufflinks 25.778     High High
cufflinks 9.095     High Low
cufflinks 16.596     High  
cufflinks 21.97     High  
cufflinks 12.915     High  
cufflinks 20.198     High  
cufflinks 16.552     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.194     Low  
cufflinks 0.843        
cufflinks 0.158     Low  
cufflinks 2.375       High
cufflinks 0.062     Low  

0 Strain