Gene : Potri.001G388600 P. trichocarpa v3.0
Defline:  (1 of 15) K00422 - polyphenol oxidase (E1.10.3.1) Genomic Order:  3886
Name:  ? Potri.001G388600 Secondary Identifier:  ? PAC:27046636
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6752 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G388600 0.5kb upstream 0.5kb upstream 2305 true Chr01: 40616391-40618695 Populus trichocarpa
Potri.001G388600 0.5kb upstream 0.5kb upstream 500 false Chr01: 40616391-40616890 Populus trichocarpa
Potri.001G388600 0.5kb downstream 0.5kb downstream 2305 true Chr01: 40616891-40619195 Populus trichocarpa
Potri.001G388600 0.5kb downstream 0.5kb downstream 500 false Chr01: 40618696-40619195 Populus trichocarpa
Potri.001G388600 1.0kb upstream 1.0kb upstream 2805 true Chr01: 40615891-40618695 Populus trichocarpa
Potri.001G388600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 40615891-40616890 Populus trichocarpa
Potri.001G388600 1.0kb downstream 1.0kb downstream 2805 true Chr01: 40616891-40619695 Populus trichocarpa
Potri.001G388600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 40618696-40619695 Populus trichocarpa
Potri.001G388600 2.0kb upstream 2.0kb upstream 3805 true Chr01: 40614891-40618695 Populus trichocarpa
Potri.001G388600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 40614891-40616890 Populus trichocarpa
Potri.001G388600 2.0kb downstream 2.0kb downstream 3805 true Chr01: 40616891-40620695 Populus trichocarpa
Potri.001G388600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 40618696-40620695 Populus trichocarpa
Potri.001G388600 5.0kb upstream 5.0kb upstream 6805 true Chr01: 40611891-40618695 Populus trichocarpa
Potri.001G388600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 40611891-40616890 Populus trichocarpa
Potri.001G388600 5.0kb downstream 5.0kb downstream 6805 true Chr01: 40616891-40623695 Populus trichocarpa
Potri.001G388600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 40618696-40623695 Populus trichocarpa
Potri.001G388600 10.0kb upstream 10.0kb upstream 11805 true Chr01: 40606891-40618695 Populus trichocarpa
Potri.001G388600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 40606891-40616890 Populus trichocarpa
Potri.001G388600 10.0kb downstream 10.0kb downstream 11805 true Chr01: 40616891-40628695 Populus trichocarpa
Potri.001G388600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 40618696-40628695 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.026     Low  
cufflinks 0.034     Low  
cufflinks 0.036     Low  
cufflinks 0.044     Low  
cufflinks 0.058     Low  
cufflinks 15.88     High High
cufflinks 2.878        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.374        
cufflinks 0.245        
cufflinks 0.029     Low  
cufflinks 40.507     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 20.88     High High
cufflinks 0.011     Low Low
cufflinks 0.021     Low  
cufflinks 0.01     Low Low
cufflinks 13.871     High High
cufflinks 0.225        
cufflinks 0.012     Low Low
cufflinks 0.182        
cufflinks 0.093     Low  
cufflinks 0.862        
cufflinks 0.142     Low  
cufflinks 0.771        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.895        
cufflinks 0.017     Low  

0 Strain