Gene : Potri.001G473200 P. trichocarpa v3.0
Defline:  (1 of 3) PTHR31636//PTHR31636:SF2 - FAMILY NOT NAMED // SCARECROW-LIKE PROTEIN 18 Genomic Order:  4732
Name:  ? Potri.001G473200 Secondary Identifier:  ? PAC:27045960
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G473200 0.5kb upstream 0.5kb upstream 1817 true Chr01: 50477441-50479257 Populus trichocarpa
Potri.001G473200 0.5kb upstream 0.5kb upstream 500 false Chr01: 50478758-50479257 Populus trichocarpa
Potri.001G473200 0.5kb downstream 0.5kb downstream 1817 true Chr01: 50476941-50478757 Populus trichocarpa
Potri.001G473200 0.5kb downstream 0.5kb downstream 500 false Chr01: 50476941-50477440 Populus trichocarpa
Potri.001G473200 1.0kb upstream 1.0kb upstream 2317 true Chr01: 50477441-50479757 Populus trichocarpa
Potri.001G473200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50478758-50479757 Populus trichocarpa
Potri.001G473200 1.0kb downstream 1.0kb downstream 2317 true Chr01: 50476441-50478757 Populus trichocarpa
Potri.001G473200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50476441-50477440 Populus trichocarpa
Potri.001G473200 2.0kb upstream 2.0kb upstream 3317 true Chr01: 50477441-50480757 Populus trichocarpa
Potri.001G473200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50478758-50480757 Populus trichocarpa
Potri.001G473200 2.0kb downstream 2.0kb downstream 3317 true Chr01: 50475441-50478757 Populus trichocarpa
Potri.001G473200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50475441-50477440 Populus trichocarpa
Potri.001G473200 5.0kb upstream 5.0kb upstream 6317 true Chr01: 50477441-50483757 Populus trichocarpa
Potri.001G473200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50478758-50483757 Populus trichocarpa
Potri.001G473200 5.0kb downstream 5.0kb downstream 6317 true Chr01: 50472441-50478757 Populus trichocarpa
Potri.001G473200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50472441-50477440 Populus trichocarpa
Potri.001G473200 10.0kb upstream 10.0kb upstream 11317 true Chr01: 50477441-50488757 Populus trichocarpa
Potri.001G473200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50478758-50488757 Populus trichocarpa
Potri.001G473200 10.0kb downstream 10.0kb downstream 11317 true Chr01: 50467441-50478757 Populus trichocarpa
Potri.001G473200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50467441-50477440 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.043     Low  
cufflinks 0.023     Low  
cufflinks 0.308       High
cufflinks 0.012     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low Low
cufflinks 0.025     Low  
cufflinks 0.164     Low High
cufflinks 0.019     Low  
cufflinks 0.209       High
cufflinks 0.015     Low  
cufflinks 0.019     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.11     Low  
cufflinks 0.009     Low Low
cufflinks 0.104     Low  
cufflinks 0.14     Low High
cufflinks 0.09     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.038     Low  
cufflinks 0.037     Low  
cufflinks 0.089     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.15     Low High
cufflinks 0.105     Low  
cufflinks 0.048     Low  

0 Strain