Gene : Potri.017G057200 P. trichocarpa v3.0
Defline:  (1 of 1) PTHR11058:SF11 - NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 3 Genomic Order:  572
Name:  ? Potri.017G057200 Secondary Identifier:  ? PAC:26984600
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5083 Populus trichocarpa pathologic  
Ptrichocarpa PWY-4302 Populus trichocarpa pathologic  
Ptrichocarpa PWY-3781 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.017G057200 0.5kb upstream 0.5kb upstream 701 true Chr17: 5149230-5149930 Populus trichocarpa
Potri.017G057200 0.5kb upstream 0.5kb upstream 500 false Chr17: 5149431-5149930 Populus trichocarpa
Potri.017G057200 0.5kb downstream 0.5kb downstream 701 true Chr17: 5148730-5149430 Populus trichocarpa
Potri.017G057200 0.5kb downstream 0.5kb downstream 500 false Chr17: 5148730-5149229 Populus trichocarpa
Potri.017G057200 1.0kb upstream 1.0kb upstream 1201 true Chr17: 5149230-5150430 Populus trichocarpa
Potri.017G057200 1.0kb upstream 1.0kb upstream 1000 false Chr17: 5149431-5150430 Populus trichocarpa
Potri.017G057200 1.0kb downstream 1.0kb downstream 1201 true Chr17: 5148230-5149430 Populus trichocarpa
Potri.017G057200 1.0kb downstream 1.0kb downstream 1000 false Chr17: 5148230-5149229 Populus trichocarpa
Potri.017G057200 2.0kb upstream 2.0kb upstream 2201 true Chr17: 5149230-5151430 Populus trichocarpa
Potri.017G057200 2.0kb upstream 2.0kb upstream 2000 false Chr17: 5149431-5151430 Populus trichocarpa
Potri.017G057200 2.0kb downstream 2.0kb downstream 2201 true Chr17: 5147230-5149430 Populus trichocarpa
Potri.017G057200 2.0kb downstream 2.0kb downstream 2000 false Chr17: 5147230-5149229 Populus trichocarpa
Potri.017G057200 5.0kb upstream 5.0kb upstream 5201 true Chr17: 5149230-5154430 Populus trichocarpa
Potri.017G057200 5.0kb upstream 5.0kb upstream 5000 false Chr17: 5149431-5154430 Populus trichocarpa
Potri.017G057200 5.0kb downstream 5.0kb downstream 5201 true Chr17: 5144230-5149430 Populus trichocarpa
Potri.017G057200 5.0kb downstream 5.0kb downstream 5000 false Chr17: 5144230-5149229 Populus trichocarpa
Potri.017G057200 10.0kb upstream 10.0kb upstream 10201 true Chr17: 5149230-5159430 Populus trichocarpa
Potri.017G057200 10.0kb upstream 10.0kb upstream 10000 false Chr17: 5149431-5159430 Populus trichocarpa
Potri.017G057200 10.0kb downstream 10.0kb downstream 10201 true Chr17: 5139230-5149430 Populus trichocarpa
Potri.017G057200 10.0kb downstream 10.0kb downstream 10000 false Chr17: 5139230-5149229 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.143     Low  
cufflinks 0.115     Low  
cufflinks 0.218       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.29       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.112     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.091     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.09     Low  
cufflinks 0.114     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.062     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain