Gene : Potri.003G191100 P. trichocarpa v3.0
Defline:  (1 of 3) K12183 - ESCRT-I complex subunit TSG101 (TSG101, STP22, VPS23) Genomic Order:  1911
Name:  ? Potri.003G191100 Secondary Identifier:  ? PAC:26997097
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G191100 0.5kb upstream 0.5kb upstream 2065   true Chr03: 19552622-19554686 Populus trichocarpa
Potri.003G191100 0.5kb upstream 0.5kb upstream 500   false Chr03: 19554187-19554686 Populus trichocarpa
Potri.003G191100 0.5kb downstream 0.5kb downstream 2065   true Chr03: 19552122-19554186 Populus trichocarpa
Potri.003G191100 0.5kb downstream 0.5kb downstream 500   false Chr03: 19552122-19552621 Populus trichocarpa
Potri.003G191100 1.0kb upstream 1.0kb upstream 2565   true Chr03: 19552622-19555186 Populus trichocarpa
Potri.003G191100 1.0kb upstream 1.0kb upstream 1000   false Chr03: 19554187-19555186 Populus trichocarpa
Potri.003G191100 1.0kb downstream 1.0kb downstream 2565   true Chr03: 19551622-19554186 Populus trichocarpa
Potri.003G191100 1.0kb downstream 1.0kb downstream 1000   false Chr03: 19551622-19552621 Populus trichocarpa
Potri.003G191100 2.0kb upstream 2.0kb upstream 3565   true Chr03: 19552622-19556186 Populus trichocarpa
Potri.003G191100 2.0kb upstream 2.0kb upstream 2000   false Chr03: 19554187-19556186 Populus trichocarpa
Potri.003G191100 2.0kb downstream 2.0kb downstream 3565   true Chr03: 19550622-19554186 Populus trichocarpa
Potri.003G191100 2.0kb downstream 2.0kb downstream 2000   false Chr03: 19550622-19552621 Populus trichocarpa
Potri.003G191100 5.0kb upstream 5.0kb upstream 6565   true Chr03: 19552622-19559186 Populus trichocarpa
Potri.003G191100 5.0kb upstream 5.0kb upstream 5000   false Chr03: 19554187-19559186 Populus trichocarpa
Potri.003G191100 5.0kb downstream 5.0kb downstream 6565   true Chr03: 19547622-19554186 Populus trichocarpa
Potri.003G191100 5.0kb downstream 5.0kb downstream 5000   false Chr03: 19547622-19552621 Populus trichocarpa
Potri.003G191100 10.0kb upstream 10.0kb upstream 11565   true Chr03: 19552622-19564186 Populus trichocarpa
Potri.003G191100 10.0kb upstream 10.0kb upstream 10000   false Chr03: 19554187-19564186 Populus trichocarpa
Potri.003G191100 10.0kb downstream 10.0kb downstream 11565   true Chr03: 19542622-19554186 Populus trichocarpa
Potri.003G191100 10.0kb downstream 10.0kb downstream 10000   false Chr03: 19542622-19552621 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.579       Low
cufflinks 8.717        
cufflinks 5.702       Low
cufflinks 8.284        
cufflinks 8.943     High  
cufflinks 5.781       Low
cufflinks 7.089        
cufflinks 10.829     High  
cufflinks 19.858     High High
cufflinks 7.287        
cufflinks 14.712     High High
cufflinks 4.878       Low
cufflinks 7.468        
cufflinks 10.272     High  
cufflinks 6.51        
cufflinks 9.007        
cufflinks 23.782     High High
cufflinks 9.14        
cufflinks 6.242        
cufflinks 10.818     High  
cufflinks 16.928     High High
cufflinks 11.213     High  
cufflinks 8.911     High  
cufflinks 13.404     High  
cufflinks 31.388     High  
cufflinks 10.28        
cufflinks 7.6       Low
cufflinks 10.419        
cufflinks 11.825        
cufflinks 20.49        

0 Strain