Gene : Potri.004G172600 P. trichocarpa v3.0
Defline:  (1 of 4) KOG3070 - Predicted RNA-binding protein containing PIN domain and invovled in translation or RNA processing Genomic Order:  1726
Name:  ? Potri.004G172600 Secondary Identifier:  ? PAC:26990347
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G172600 0.5kb upstream 0.5kb upstream 1731 true Chr04: 19134602-19136332 Populus trichocarpa
Potri.004G172600 0.5kb upstream 0.5kb upstream 500 false Chr04: 19134602-19135101 Populus trichocarpa
Potri.004G172600 0.5kb downstream 0.5kb downstream 1731 true Chr04: 19135102-19136832 Populus trichocarpa
Potri.004G172600 0.5kb downstream 0.5kb downstream 500 false Chr04: 19136333-19136832 Populus trichocarpa
Potri.004G172600 1.0kb upstream 1.0kb upstream 2231 true Chr04: 19134102-19136332 Populus trichocarpa
Potri.004G172600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 19134102-19135101 Populus trichocarpa
Potri.004G172600 1.0kb downstream 1.0kb downstream 2231 true Chr04: 19135102-19137332 Populus trichocarpa
Potri.004G172600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 19136333-19137332 Populus trichocarpa
Potri.004G172600 2.0kb upstream 2.0kb upstream 3231 true Chr04: 19133102-19136332 Populus trichocarpa
Potri.004G172600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 19133102-19135101 Populus trichocarpa
Potri.004G172600 2.0kb downstream 2.0kb downstream 3231 true Chr04: 19135102-19138332 Populus trichocarpa
Potri.004G172600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 19136333-19138332 Populus trichocarpa
Potri.004G172600 5.0kb upstream 5.0kb upstream 6231 true Chr04: 19130102-19136332 Populus trichocarpa
Potri.004G172600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 19130102-19135101 Populus trichocarpa
Potri.004G172600 5.0kb downstream 5.0kb downstream 6231 true Chr04: 19135102-19141332 Populus trichocarpa
Potri.004G172600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 19136333-19141332 Populus trichocarpa
Potri.004G172600 10.0kb upstream 10.0kb upstream 11231 true Chr04: 19125102-19136332 Populus trichocarpa
Potri.004G172600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 19125102-19135101 Populus trichocarpa
Potri.004G172600 10.0kb downstream 10.0kb downstream 11231 true Chr04: 19135102-19146332 Populus trichocarpa
Potri.004G172600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 19136333-19146332 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.651        
cufflinks 105.905     High Low
cufflinks 196.423     High  
cufflinks 219.06     High  
cufflinks 94.806     High Low
cufflinks 126.824     High Low
cufflinks 147.744     High  
cufflinks 192.216     High  
cufflinks 250.401     High  
cufflinks 186.281     High  
cufflinks 176.029     High  
cufflinks 119.686     High Low
cufflinks 254.858     High  
cufflinks 195.466     High  
cufflinks 252.904     High  
cufflinks 250.196     High  
cufflinks 126.605     High Low
cufflinks 167.61     High  
cufflinks 326.707     High High
cufflinks 87.788     High Low
cufflinks 261.956     High High
cufflinks 191.51     High  
cufflinks 238.667     High  
cufflinks 169.945     High  
cufflinks 241.75     High  
cufflinks 18.696        
cufflinks 11.231        
cufflinks 18.506        
cufflinks 39.099     High High
cufflinks 15.794        

0 Strain