Gene : Potri.004G207000 P. trichocarpa v3.0
Defline:  (1 of 1) K00872 - homoserine kinase (thrB1) Genomic Order:  2070
Name:  ? Potri.004G207000 Secondary Identifier:  ? PAC:26991013
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-3001 Populus trichocarpa pathologic  
Ptrichocarpa PWY-724 Populus trichocarpa pathologic  
Ptrichocarpa PWY-702 Populus trichocarpa pathologic  
Ptrichocarpa HOMOSER-THRESYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa THRESYN-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G207000 0.5kb upstream 0.5kb upstream 1939 true Chr04: 21591948-21593886 Populus trichocarpa
Potri.004G207000 0.5kb upstream 0.5kb upstream 500 false Chr04: 21591948-21592447 Populus trichocarpa
Potri.004G207000 0.5kb downstream 0.5kb downstream 1939 true Chr04: 21592448-21594386 Populus trichocarpa
Potri.004G207000 0.5kb downstream 0.5kb downstream 500 false Chr04: 21593887-21594386 Populus trichocarpa
Potri.004G207000 1.0kb upstream 1.0kb upstream 2439 true Chr04: 21591448-21593886 Populus trichocarpa
Potri.004G207000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 21591448-21592447 Populus trichocarpa
Potri.004G207000 1.0kb downstream 1.0kb downstream 2439 true Chr04: 21592448-21594886 Populus trichocarpa
Potri.004G207000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 21593887-21594886 Populus trichocarpa
Potri.004G207000 2.0kb upstream 2.0kb upstream 3439 true Chr04: 21590448-21593886 Populus trichocarpa
Potri.004G207000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 21590448-21592447 Populus trichocarpa
Potri.004G207000 2.0kb downstream 2.0kb downstream 3439 true Chr04: 21592448-21595886 Populus trichocarpa
Potri.004G207000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 21593887-21595886 Populus trichocarpa
Potri.004G207000 5.0kb upstream 5.0kb upstream 6439 true Chr04: 21587448-21593886 Populus trichocarpa
Potri.004G207000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 21587448-21592447 Populus trichocarpa
Potri.004G207000 5.0kb downstream 5.0kb downstream 6439 true Chr04: 21592448-21598886 Populus trichocarpa
Potri.004G207000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 21593887-21598886 Populus trichocarpa
Potri.004G207000 10.0kb upstream 10.0kb upstream 11439 true Chr04: 21582448-21593886 Populus trichocarpa
Potri.004G207000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 21582448-21592447 Populus trichocarpa
Potri.004G207000 10.0kb downstream 10.0kb downstream 11439 true Chr04: 21592448-21603886 Populus trichocarpa
Potri.004G207000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 21593887-21603886 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.25        
cufflinks 5.244        
cufflinks 10.576     High  
cufflinks 4.073       Low
cufflinks 4.81        
cufflinks 7.988        
cufflinks 8.469        
cufflinks 10.527     High  
cufflinks 8.411        
cufflinks 4.19       Low
cufflinks 11.208     High  
cufflinks 12.195     High High
cufflinks 7.576        
cufflinks 5.666        
cufflinks 10.853     High  
cufflinks 6.213        
cufflinks 8.282        
cufflinks 9.736     High  
cufflinks 1.222       Low
cufflinks 6.394        
cufflinks 6.99        
cufflinks 6.213        
cufflinks 14.127     High High
cufflinks 7.936        
cufflinks 10.417     High  
cufflinks 6.645        
cufflinks 5.97        
cufflinks 9.121        
cufflinks 10.914       High
cufflinks 6.463        

0 Strain