Gene : Potri.006G150600 P. trichocarpa v3.0
Defline:  (1 of 2) 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase Genomic Order:  1506
Name:  ? Potri.006G150600 Secondary Identifier:  ? PAC:27006532
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Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6556 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7196 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7193 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7199 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7200 Populus trichocarpa pathologic  

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G150600 0.5kb upstream 0.5kb upstream 1833 true Chr06: 13156598-13158430 Populus trichocarpa
Potri.006G150600 0.5kb upstream 0.5kb upstream 500 false Chr06: 13156598-13157097 Populus trichocarpa
Potri.006G150600 0.5kb downstream 0.5kb downstream 1833 true Chr06: 13157098-13158930 Populus trichocarpa
Potri.006G150600 0.5kb downstream 0.5kb downstream 500 false Chr06: 13158431-13158930 Populus trichocarpa
Potri.006G150600 1.0kb upstream 1.0kb upstream 2333 true Chr06: 13156098-13158430 Populus trichocarpa
Potri.006G150600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 13156098-13157097 Populus trichocarpa
Potri.006G150600 1.0kb downstream 1.0kb downstream 2333 true Chr06: 13157098-13159430 Populus trichocarpa
Potri.006G150600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 13158431-13159430 Populus trichocarpa
Potri.006G150600 2.0kb upstream 2.0kb upstream 3333 true Chr06: 13155098-13158430 Populus trichocarpa
Potri.006G150600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 13155098-13157097 Populus trichocarpa
Potri.006G150600 2.0kb downstream 2.0kb downstream 3333 true Chr06: 13157098-13160430 Populus trichocarpa
Potri.006G150600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 13158431-13160430 Populus trichocarpa
Potri.006G150600 5.0kb upstream 5.0kb upstream 6333 true Chr06: 13152098-13158430 Populus trichocarpa
Potri.006G150600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 13152098-13157097 Populus trichocarpa
Potri.006G150600 5.0kb downstream 5.0kb downstream 6333 true Chr06: 13157098-13163430 Populus trichocarpa
Potri.006G150600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 13158431-13163430 Populus trichocarpa
Potri.006G150600 10.0kb upstream 10.0kb upstream 11333 true Chr06: 13147098-13158430 Populus trichocarpa
Potri.006G150600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 13147098-13157097 Populus trichocarpa
Potri.006G150600 10.0kb downstream 10.0kb downstream 11333 true Chr06: 13157098-13168430 Populus trichocarpa
Potri.006G150600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 13158431-13168430 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.403        
cufflinks 20.002     High High
cufflinks 7.434        
cufflinks 10.591     High  
cufflinks 7.279        
cufflinks 2.149       Low
cufflinks 5.053        
cufflinks 2.795       Low
cufflinks 12.976     High  
cufflinks 11.871     High  
cufflinks 17.468     High High
cufflinks 6.661        
cufflinks 7.619        
cufflinks 12.141     High  
cufflinks 3.06       Low
cufflinks 20.278     High High
cufflinks 11.088     High  
cufflinks 8.543     High  
cufflinks 17.327     High High
cufflinks 6.286        
cufflinks 3.219       Low
cufflinks 11.325     High  
cufflinks 8.253        
cufflinks 4.784        
cufflinks 9.189     High  
cufflinks 5.361        
cufflinks 2.45       Low
cufflinks 4.318        
cufflinks 3.309        
cufflinks 10.809        

0 Strain