Gene : Potri.011G109700 P. trichocarpa v3.0
Defline:  (1 of 1) PTHR31104//PTHR31104:SF1 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K15M2 Genomic Order:  1097
Name:  ? Potri.011G109700 Secondary Identifier:  ? PAC:27001235
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.011G109700 0.5kb upstream 0.5kb upstream 3952 true Chr11: 13398235-13402186 Populus trichocarpa
Potri.011G109700 0.5kb upstream 0.5kb upstream 500 false Chr11: 13398235-13398734 Populus trichocarpa
Potri.011G109700 0.5kb downstream 0.5kb downstream 3952 true Chr11: 13398735-13402686 Populus trichocarpa
Potri.011G109700 0.5kb downstream 0.5kb downstream 500 false Chr11: 13402187-13402686 Populus trichocarpa
Potri.011G109700 1.0kb upstream 1.0kb upstream 4452 true Chr11: 13397735-13402186 Populus trichocarpa
Potri.011G109700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 13397735-13398734 Populus trichocarpa
Potri.011G109700 1.0kb downstream 1.0kb downstream 4452 true Chr11: 13398735-13403186 Populus trichocarpa
Potri.011G109700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 13402187-13403186 Populus trichocarpa
Potri.011G109700 2.0kb upstream 2.0kb upstream 5452 true Chr11: 13396735-13402186 Populus trichocarpa
Potri.011G109700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 13396735-13398734 Populus trichocarpa
Potri.011G109700 2.0kb downstream 2.0kb downstream 5452 true Chr11: 13398735-13404186 Populus trichocarpa
Potri.011G109700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 13402187-13404186 Populus trichocarpa
Potri.011G109700 5.0kb upstream 5.0kb upstream 8452 true Chr11: 13393735-13402186 Populus trichocarpa
Potri.011G109700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 13393735-13398734 Populus trichocarpa
Potri.011G109700 5.0kb downstream 5.0kb downstream 8452 true Chr11: 13398735-13407186 Populus trichocarpa
Potri.011G109700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 13402187-13407186 Populus trichocarpa
Potri.011G109700 10.0kb upstream 10.0kb upstream 13452 true Chr11: 13388735-13402186 Populus trichocarpa
Potri.011G109700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 13388735-13398734 Populus trichocarpa
Potri.011G109700 10.0kb downstream 10.0kb downstream 13452 true Chr11: 13398735-13412186 Populus trichocarpa
Potri.011G109700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 13402187-13412186 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.21     High  
cufflinks 9.885     High  
cufflinks 7.834        
cufflinks 9.721     High  
cufflinks 4.528       Low
cufflinks 15.813     High  
cufflinks 8.318        
cufflinks 11.808     High  
cufflinks 28.33     High High
cufflinks 12.316     High  
cufflinks 11.178     High  
cufflinks 23.038     High High
cufflinks 9.949        
cufflinks 14.216     High  
cufflinks 11.6     High  
cufflinks 10.484     High  
cufflinks 8.378        
cufflinks 5.887       Low
cufflinks 11.557     High  
cufflinks 15.901     High  
cufflinks 12.155     High  
cufflinks 10.487     High  
cufflinks 21.921     High High
cufflinks 22.979     High High
cufflinks 5.242        
cufflinks 4.4        
cufflinks 5.553        
cufflinks 6.638        
cufflinks 8.894       High
cufflinks 5.443        

0 Strain