Gene : Potri.013G138300 P. trichocarpa v3.0
Defline:  (1 of 3) K02703 - photosystem II P680 reaction center D1 protein (psbA) Genomic Order:  1383
Name:  ? Potri.013G138300 Secondary Identifier:  ? PAC:26993824
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-101 Populus trichocarpa pathologic  
Ptrichocarpa PHOTOALL-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.013G138300 0.5kb upstream 0.5kb upstream 1562 true Chr13: 14728535-14730096 Populus trichocarpa
Potri.013G138300 0.5kb upstream 0.5kb upstream 500 false Chr13: 14728535-14729034 Populus trichocarpa
Potri.013G138300 0.5kb downstream 0.5kb downstream 1562 true Chr13: 14729035-14730596 Populus trichocarpa
Potri.013G138300 0.5kb downstream 0.5kb downstream 500 false Chr13: 14730097-14730596 Populus trichocarpa
Potri.013G138300 1.0kb upstream 1.0kb upstream 2062 true Chr13: 14728035-14730096 Populus trichocarpa
Potri.013G138300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 14728035-14729034 Populus trichocarpa
Potri.013G138300 1.0kb downstream 1.0kb downstream 2062 true Chr13: 14729035-14731096 Populus trichocarpa
Potri.013G138300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 14730097-14731096 Populus trichocarpa
Potri.013G138300 2.0kb upstream 2.0kb upstream 3062 true Chr13: 14727035-14730096 Populus trichocarpa
Potri.013G138300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 14727035-14729034 Populus trichocarpa
Potri.013G138300 2.0kb downstream 2.0kb downstream 3062 true Chr13: 14729035-14732096 Populus trichocarpa
Potri.013G138300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 14730097-14732096 Populus trichocarpa
Potri.013G138300 5.0kb upstream 5.0kb upstream 6062 true Chr13: 14724035-14730096 Populus trichocarpa
Potri.013G138300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 14724035-14729034 Populus trichocarpa
Potri.013G138300 5.0kb downstream 5.0kb downstream 6062 true Chr13: 14729035-14735096 Populus trichocarpa
Potri.013G138300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 14730097-14735096 Populus trichocarpa
Potri.013G138300 10.0kb upstream 10.0kb upstream 11062 true Chr13: 14719035-14730096 Populus trichocarpa
Potri.013G138300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 14719035-14729034 Populus trichocarpa
Potri.013G138300 10.0kb downstream 10.0kb downstream 11062 true Chr13: 14729035-14740096 Populus trichocarpa
Potri.013G138300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 14730097-14740096 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain