Gene : Potri.013G143200 P. trichocarpa v3.0
Defline:  (1 of 3) K02703 - photosystem II P680 reaction center D1 protein (psbA) Genomic Order:  1432
Name:  ? Potri.013G143200 Secondary Identifier:  ? PAC:26995871
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-101 Populus trichocarpa pathologic  
Ptrichocarpa PHOTOALL-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.013G143200 0.5kb upstream 0.5kb upstream 1611 true Chr13: 14894428-14896038 Populus trichocarpa
Potri.013G143200 0.5kb upstream 0.5kb upstream 500 false Chr13: 14894428-14894927 Populus trichocarpa
Potri.013G143200 0.5kb downstream 0.5kb downstream 1611 true Chr13: 14894928-14896538 Populus trichocarpa
Potri.013G143200 0.5kb downstream 0.5kb downstream 500 false Chr13: 14896039-14896538 Populus trichocarpa
Potri.013G143200 1.0kb upstream 1.0kb upstream 2111 true Chr13: 14893928-14896038 Populus trichocarpa
Potri.013G143200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 14893928-14894927 Populus trichocarpa
Potri.013G143200 1.0kb downstream 1.0kb downstream 2111 true Chr13: 14894928-14897038 Populus trichocarpa
Potri.013G143200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 14896039-14897038 Populus trichocarpa
Potri.013G143200 2.0kb upstream 2.0kb upstream 3111 true Chr13: 14892928-14896038 Populus trichocarpa
Potri.013G143200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 14892928-14894927 Populus trichocarpa
Potri.013G143200 2.0kb downstream 2.0kb downstream 3111 true Chr13: 14894928-14898038 Populus trichocarpa
Potri.013G143200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 14896039-14898038 Populus trichocarpa
Potri.013G143200 5.0kb upstream 5.0kb upstream 6111 true Chr13: 14889928-14896038 Populus trichocarpa
Potri.013G143200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 14889928-14894927 Populus trichocarpa
Potri.013G143200 5.0kb downstream 5.0kb downstream 6111 true Chr13: 14894928-14901038 Populus trichocarpa
Potri.013G143200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 14896039-14901038 Populus trichocarpa
Potri.013G143200 10.0kb upstream 10.0kb upstream 11111 true Chr13: 14884928-14896038 Populus trichocarpa
Potri.013G143200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 14884928-14894927 Populus trichocarpa
Potri.013G143200 10.0kb downstream 10.0kb downstream 11111 true Chr13: 14894928-14906038 Populus trichocarpa
Potri.013G143200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 14896039-14906038 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain