Gene : Brdisv1BdTR13C1042136m.g B. distachyon BdTR13c v1
Defline:  (1 of 18) PF04195 - Putative gypsy type transposon (Transposase_28) Genomic Order:  1748
Name:  ? Brdisv1BdTR13C1042136m.g Secondary Identifier:  ? PAC:34983433
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brdisv1BdTR13C1042136m.g 0.5kb upstream 0.5kb upstream 2671 true pseudomolecule_8: 23403527-23406197 Brachypodium distachyon BdTR13c
Brdisv1BdTR13C1042136m.g 0.5kb upstream 0.5kb upstream 500 false pseudomolecule_8: 23403527-23404026 Brachypodium distachyon BdTR13c
Brdisv1BdTR13C1042136m.g 0.5kb downstream 0.5kb downstream 2671 true pseudomolecule_8: 23404027-23406697 Brachypodium distachyon BdTR13c
Brdisv1BdTR13C1042136m.g 0.5kb downstream 0.5kb downstream 500 false pseudomolecule_8: 23406198-23406697 Brachypodium distachyon BdTR13c
Brdisv1BdTR13C1042136m.g 1.0kb upstream 1.0kb upstream 3171 true pseudomolecule_8: 23403027-23406197 Brachypodium distachyon BdTR13c
Brdisv1BdTR13C1042136m.g 1.0kb upstream 1.0kb upstream 1000 false pseudomolecule_8: 23403027-23404026 Brachypodium distachyon BdTR13c
Brdisv1BdTR13C1042136m.g 1.0kb downstream 1.0kb downstream 3171 true pseudomolecule_8: 23404027-23407197 Brachypodium distachyon BdTR13c
Brdisv1BdTR13C1042136m.g 1.0kb downstream 1.0kb downstream 1000 false pseudomolecule_8: 23406198-23407197 Brachypodium distachyon BdTR13c
Brdisv1BdTR13C1042136m.g 2.0kb upstream 2.0kb upstream 4171 true pseudomolecule_8: 23402027-23406197 Brachypodium distachyon BdTR13c
Brdisv1BdTR13C1042136m.g 2.0kb upstream 2.0kb upstream 2000 false pseudomolecule_8: 23402027-23404026 Brachypodium distachyon BdTR13c
Brdisv1BdTR13C1042136m.g 2.0kb downstream 2.0kb downstream 4171 true pseudomolecule_8: 23404027-23408197 Brachypodium distachyon BdTR13c
Brdisv1BdTR13C1042136m.g 2.0kb downstream 2.0kb downstream 2000 false pseudomolecule_8: 23406198-23408197 Brachypodium distachyon BdTR13c
Brdisv1BdTR13C1042136m.g 5.0kb upstream 5.0kb upstream 7171 true pseudomolecule_8: 23399027-23406197 Brachypodium distachyon BdTR13c
Brdisv1BdTR13C1042136m.g 5.0kb upstream 5.0kb upstream 5000 false pseudomolecule_8: 23399027-23404026 Brachypodium distachyon BdTR13c
Brdisv1BdTR13C1042136m.g 5.0kb downstream 5.0kb downstream 7171 true pseudomolecule_8: 23404027-23411197 Brachypodium distachyon BdTR13c
Brdisv1BdTR13C1042136m.g 5.0kb downstream 5.0kb downstream 5000 false pseudomolecule_8: 23406198-23411197 Brachypodium distachyon BdTR13c
Brdisv1BdTR13C1042136m.g 10.0kb upstream 10.0kb upstream 12171 true pseudomolecule_8: 23394027-23406197 Brachypodium distachyon BdTR13c
Brdisv1BdTR13C1042136m.g 10.0kb upstream 10.0kb upstream 10000 false pseudomolecule_8: 23394027-23404026 Brachypodium distachyon BdTR13c
Brdisv1BdTR13C1042136m.g 10.0kb downstream 10.0kb downstream 12171 true pseudomolecule_8: 23404027-23416197 Brachypodium distachyon BdTR13c
Brdisv1BdTR13C1042136m.g 10.0kb downstream 10.0kb downstream 10000 false pseudomolecule_8: 23406198-23416197 Brachypodium distachyon BdTR13c

1 Protein Family

Cluster ID Method ID Method Name Sequence Alignment
66116797 5043 BrachyPan View MSA

0 Rna Seq Expressions

1 Strain

DB identifier