Gene : Gorai.001G016500 G. raimondii v2.1
Defline:  (1 of 45) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) Genomic Order:  165
Name:  ? Gorai.001G016500 Secondary Identifier:  ? PAC:26822662
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G016500 0.5kb upstream 0.5kb upstream 4846 true Chr01: 1521488-1526333 Gossypium raimondii
Gorai.001G016500 0.5kb upstream 0.5kb upstream 500 false Chr01: 1521488-1521987 Gossypium raimondii
Gorai.001G016500 0.5kb downstream 0.5kb downstream 4846 true Chr01: 1521988-1526833 Gossypium raimondii
Gorai.001G016500 0.5kb downstream 0.5kb downstream 500 false Chr01: 1526334-1526833 Gossypium raimondii
Gorai.001G016500 1.0kb upstream 1.0kb upstream 5346 true Chr01: 1520988-1526333 Gossypium raimondii
Gorai.001G016500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1520988-1521987 Gossypium raimondii
Gorai.001G016500 1.0kb downstream 1.0kb downstream 5346 true Chr01: 1521988-1527333 Gossypium raimondii
Gorai.001G016500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1526334-1527333 Gossypium raimondii
Gorai.001G016500 2.0kb upstream 2.0kb upstream 6346 true Chr01: 1519988-1526333 Gossypium raimondii
Gorai.001G016500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1519988-1521987 Gossypium raimondii
Gorai.001G016500 2.0kb downstream 2.0kb downstream 6346 true Chr01: 1521988-1528333 Gossypium raimondii
Gorai.001G016500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1526334-1528333 Gossypium raimondii
Gorai.001G016500 5.0kb upstream 5.0kb upstream 9346 true Chr01: 1516988-1526333 Gossypium raimondii
Gorai.001G016500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1516988-1521987 Gossypium raimondii
Gorai.001G016500 5.0kb downstream 5.0kb downstream 9346 true Chr01: 1521988-1531333 Gossypium raimondii
Gorai.001G016500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1526334-1531333 Gossypium raimondii
Gorai.001G016500 10.0kb upstream 10.0kb upstream 14346 true Chr01: 1511988-1526333 Gossypium raimondii
Gorai.001G016500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1511988-1521987 Gossypium raimondii
Gorai.001G016500 10.0kb downstream 10.0kb downstream 14346 true Chr01: 1521988-1536333 Gossypium raimondii
Gorai.001G016500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1526334-1536333 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026431 5273 Angiosperm View MSA
123804336 5264 Brassicales-Malvales Singleton cluster - no MSA
124301370 5266 SBM Singleton cluster - no MSA
124152372 5268 Malvidae Singleton cluster - no MSA
124042732 5270 Rosid View MSA
123751274 5271 Pentapetalae View MSA
122794411 5272 Eudicot View MSA
121348629 5274 Embryophyte View MSA
123380947 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain