Gene : Gorai.001G039800 G. raimondii v2.1
Defline:  (1 of 2) PTHR21242 - TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 10 Genomic Order:  398
Name:  ? Gorai.001G039800 Secondary Identifier:  ? PAC:26824875
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G039800 0.5kb upstream 0.5kb upstream 2783 true Chr01: 3699150-3701932 Gossypium raimondii
Gorai.001G039800 0.5kb upstream 0.5kb upstream 500 false Chr01: 3699150-3699649 Gossypium raimondii
Gorai.001G039800 0.5kb downstream 0.5kb downstream 2783 true Chr01: 3699650-3702432 Gossypium raimondii
Gorai.001G039800 0.5kb downstream 0.5kb downstream 500 false Chr01: 3701933-3702432 Gossypium raimondii
Gorai.001G039800 1.0kb upstream 1.0kb upstream 3283 true Chr01: 3698650-3701932 Gossypium raimondii
Gorai.001G039800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 3698650-3699649 Gossypium raimondii
Gorai.001G039800 1.0kb downstream 1.0kb downstream 3283 true Chr01: 3699650-3702932 Gossypium raimondii
Gorai.001G039800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 3701933-3702932 Gossypium raimondii
Gorai.001G039800 2.0kb upstream 2.0kb upstream 4283 true Chr01: 3697650-3701932 Gossypium raimondii
Gorai.001G039800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 3697650-3699649 Gossypium raimondii
Gorai.001G039800 2.0kb downstream 2.0kb downstream 4283 true Chr01: 3699650-3703932 Gossypium raimondii
Gorai.001G039800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 3701933-3703932 Gossypium raimondii
Gorai.001G039800 5.0kb upstream 5.0kb upstream 7283 true Chr01: 3694650-3701932 Gossypium raimondii
Gorai.001G039800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 3694650-3699649 Gossypium raimondii
Gorai.001G039800 5.0kb downstream 5.0kb downstream 7283 true Chr01: 3699650-3706932 Gossypium raimondii
Gorai.001G039800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 3701933-3706932 Gossypium raimondii
Gorai.001G039800 10.0kb upstream 10.0kb upstream 12283 true Chr01: 3689650-3701932 Gossypium raimondii
Gorai.001G039800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 3689650-3699649 Gossypium raimondii
Gorai.001G039800 10.0kb downstream 10.0kb downstream 12283 true Chr01: 3699650-3711932 Gossypium raimondii
Gorai.001G039800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 3701933-3711932 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829858 5264 Brassicales-Malvales View MSA
124341655 5266 SBM View MSA
124239078 5268 Malvidae View MSA
124061135 5270 Rosid View MSA
123740018 5271 Pentapetalae View MSA
122796575 5272 Eudicot View MSA
122043600 5273 Angiosperm View MSA
121344919 5274 Embryophyte View MSA
123424848 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain