Gene : Gorai.001G047900 G. raimondii v2.1
Defline:  (1 of 1) PTHR15835:SF2 - NUCLEAR-INTERACTING PARTNER OF ALK Genomic Order:  479
Name:  ? Gorai.001G047900 Secondary Identifier:  ? PAC:26824700
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G047900 0.5kb upstream 0.5kb upstream 6712 true Chr01: 4570290-4577001 Gossypium raimondii
Gorai.001G047900 0.5kb upstream 0.5kb upstream 500 false Chr01: 4570290-4570789 Gossypium raimondii
Gorai.001G047900 0.5kb downstream 0.5kb downstream 6712 true Chr01: 4570790-4577501 Gossypium raimondii
Gorai.001G047900 0.5kb downstream 0.5kb downstream 500 false Chr01: 4577002-4577501 Gossypium raimondii
Gorai.001G047900 1.0kb upstream 1.0kb upstream 7212 true Chr01: 4569790-4577001 Gossypium raimondii
Gorai.001G047900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 4569790-4570789 Gossypium raimondii
Gorai.001G047900 1.0kb downstream 1.0kb downstream 7212 true Chr01: 4570790-4578001 Gossypium raimondii
Gorai.001G047900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 4577002-4578001 Gossypium raimondii
Gorai.001G047900 2.0kb upstream 2.0kb upstream 8212 true Chr01: 4568790-4577001 Gossypium raimondii
Gorai.001G047900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 4568790-4570789 Gossypium raimondii
Gorai.001G047900 2.0kb downstream 2.0kb downstream 8212 true Chr01: 4570790-4579001 Gossypium raimondii
Gorai.001G047900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 4577002-4579001 Gossypium raimondii
Gorai.001G047900 5.0kb upstream 5.0kb upstream 11212 true Chr01: 4565790-4577001 Gossypium raimondii
Gorai.001G047900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 4565790-4570789 Gossypium raimondii
Gorai.001G047900 5.0kb downstream 5.0kb downstream 11212 true Chr01: 4570790-4582001 Gossypium raimondii
Gorai.001G047900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 4577002-4582001 Gossypium raimondii
Gorai.001G047900 10.0kb upstream 10.0kb upstream 16212 true Chr01: 4560790-4577001 Gossypium raimondii
Gorai.001G047900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 4560790-4570789 Gossypium raimondii
Gorai.001G047900 10.0kb downstream 10.0kb downstream 16212 true Chr01: 4570790-4587001 Gossypium raimondii
Gorai.001G047900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 4577002-4587001 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828673 5264 Brassicales-Malvales View MSA
124342376 5266 SBM View MSA
124241042 5268 Malvidae View MSA
124062210 5270 Rosid View MSA
123740172 5271 Pentapetalae View MSA
122787275 5272 Eudicot View MSA
122048012 5273 Angiosperm View MSA
121349794 5274 Embryophyte View MSA
123428489 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain