Gene : Gorai.001G054400 G. raimondii v2.1
Defline:  (1 of 1) 2.1.1.11 - Magnesium protoporphyrin IX methyltransferase / S-adenosylmethioninemagnesium protoporphyrin methyltransferase Genomic Order:  544
Name:  ? Gorai.001G054400 Secondary Identifier:  ? PAC:26821650
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii CHLOROPHYLL-SYN Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G054400 0.5kb upstream 0.5kb upstream 2309 true Chr01: 5198523-5200831 Gossypium raimondii
Gorai.001G054400 0.5kb upstream 0.5kb upstream 500 false Chr01: 5200332-5200831 Gossypium raimondii
Gorai.001G054400 0.5kb downstream 0.5kb downstream 2309 true Chr01: 5198023-5200331 Gossypium raimondii
Gorai.001G054400 0.5kb downstream 0.5kb downstream 500 false Chr01: 5198023-5198522 Gossypium raimondii
Gorai.001G054400 1.0kb upstream 1.0kb upstream 2809 true Chr01: 5198523-5201331 Gossypium raimondii
Gorai.001G054400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 5200332-5201331 Gossypium raimondii
Gorai.001G054400 1.0kb downstream 1.0kb downstream 2809 true Chr01: 5197523-5200331 Gossypium raimondii
Gorai.001G054400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 5197523-5198522 Gossypium raimondii
Gorai.001G054400 2.0kb upstream 2.0kb upstream 3809 true Chr01: 5198523-5202331 Gossypium raimondii
Gorai.001G054400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 5200332-5202331 Gossypium raimondii
Gorai.001G054400 2.0kb downstream 2.0kb downstream 3809 true Chr01: 5196523-5200331 Gossypium raimondii
Gorai.001G054400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 5196523-5198522 Gossypium raimondii
Gorai.001G054400 5.0kb upstream 5.0kb upstream 6809 true Chr01: 5198523-5205331 Gossypium raimondii
Gorai.001G054400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 5200332-5205331 Gossypium raimondii
Gorai.001G054400 5.0kb downstream 5.0kb downstream 6809 true Chr01: 5193523-5200331 Gossypium raimondii
Gorai.001G054400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 5193523-5198522 Gossypium raimondii
Gorai.001G054400 10.0kb upstream 10.0kb upstream 11809 true Chr01: 5198523-5210331 Gossypium raimondii
Gorai.001G054400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 5200332-5210331 Gossypium raimondii
Gorai.001G054400 10.0kb downstream 10.0kb downstream 11809 true Chr01: 5188523-5200331 Gossypium raimondii
Gorai.001G054400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 5188523-5198522 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828001 5264 Brassicales-Malvales View MSA
124344957 5266 SBM View MSA
124250095 5268 Malvidae View MSA
124063619 5270 Rosid View MSA
123739209 5271 Pentapetalae View MSA
122792870 5272 Eudicot View MSA
122043100 5273 Angiosperm View MSA
121345477 5274 Embryophyte View MSA
123424951 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain