Gene : Gorai.001G052700 G. raimondii v2.1
Defline:  (1 of 1) PTHR11404:SF24 - SUPEROXIDE DISMUTASE [FE] 2, CHLOROPLASTIC Genomic Order:  527
Name:  ? Gorai.001G052700 Secondary Identifier:  ? PAC:26822674
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii DETOX1-PWY Gossypium raimondii pathologic  
Graimondii DETOX1-PWY-1 Gossypium raimondii pathologic  
Graimondii PWY-6854 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G052700 0.5kb upstream 0.5kb upstream 4796 true Chr01: 5004060-5008855 Gossypium raimondii
Gorai.001G052700 0.5kb upstream 0.5kb upstream 500 false Chr01: 5004060-5004559 Gossypium raimondii
Gorai.001G052700 0.5kb downstream 0.5kb downstream 4796 true Chr01: 5004560-5009355 Gossypium raimondii
Gorai.001G052700 0.5kb downstream 0.5kb downstream 500 false Chr01: 5008856-5009355 Gossypium raimondii
Gorai.001G052700 1.0kb upstream 1.0kb upstream 5296 true Chr01: 5003560-5008855 Gossypium raimondii
Gorai.001G052700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 5003560-5004559 Gossypium raimondii
Gorai.001G052700 1.0kb downstream 1.0kb downstream 5296 true Chr01: 5004560-5009855 Gossypium raimondii
Gorai.001G052700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 5008856-5009855 Gossypium raimondii
Gorai.001G052700 2.0kb upstream 2.0kb upstream 6296 true Chr01: 5002560-5008855 Gossypium raimondii
Gorai.001G052700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 5002560-5004559 Gossypium raimondii
Gorai.001G052700 2.0kb downstream 2.0kb downstream 6296 true Chr01: 5004560-5010855 Gossypium raimondii
Gorai.001G052700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 5008856-5010855 Gossypium raimondii
Gorai.001G052700 5.0kb upstream 5.0kb upstream 9296 true Chr01: 4999560-5008855 Gossypium raimondii
Gorai.001G052700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 4999560-5004559 Gossypium raimondii
Gorai.001G052700 5.0kb downstream 5.0kb downstream 9296 true Chr01: 5004560-5013855 Gossypium raimondii
Gorai.001G052700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 5008856-5013855 Gossypium raimondii
Gorai.001G052700 10.0kb upstream 10.0kb upstream 14296 true Chr01: 4994560-5008855 Gossypium raimondii
Gorai.001G052700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 4994560-5004559 Gossypium raimondii
Gorai.001G052700 10.0kb downstream 10.0kb downstream 14296 true Chr01: 5004560-5018855 Gossypium raimondii
Gorai.001G052700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 5008856-5018855 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830652 5264 Brassicales-Malvales View MSA
124342635 5266 SBM View MSA
124246967 5268 Malvidae View MSA
124072391 5270 Rosid View MSA
123741409 5271 Pentapetalae View MSA
122787652 5272 Eudicot View MSA
122047747 5273 Angiosperm View MSA
121351401 5274 Embryophyte View MSA
123425969 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain