Gene : Gorai.001G079100 G. raimondii v2.1
Defline:  (1 of 1) PTHR23327:SF9 - ZINC FINGER (C3HC4-TYPE RING FINGER) FAMILY PROTEIN Genomic Order:  791
Name:  ? Gorai.001G079100 Secondary Identifier:  ? PAC:26822059
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-7511 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G079100 0.5kb upstream 0.5kb upstream 9120 true Chr01: 8226702-8235821 Gossypium raimondii
Gorai.001G079100 0.5kb upstream 0.5kb upstream 500 false Chr01: 8226702-8227201 Gossypium raimondii
Gorai.001G079100 0.5kb downstream 0.5kb downstream 9120 true Chr01: 8227202-8236321 Gossypium raimondii
Gorai.001G079100 0.5kb downstream 0.5kb downstream 500 false Chr01: 8235822-8236321 Gossypium raimondii
Gorai.001G079100 1.0kb upstream 1.0kb upstream 9620 true Chr01: 8226202-8235821 Gossypium raimondii
Gorai.001G079100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 8226202-8227201 Gossypium raimondii
Gorai.001G079100 1.0kb downstream 1.0kb downstream 9620 true Chr01: 8227202-8236821 Gossypium raimondii
Gorai.001G079100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 8235822-8236821 Gossypium raimondii
Gorai.001G079100 2.0kb upstream 2.0kb upstream 10620 true Chr01: 8225202-8235821 Gossypium raimondii
Gorai.001G079100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 8225202-8227201 Gossypium raimondii
Gorai.001G079100 2.0kb downstream 2.0kb downstream 10620 true Chr01: 8227202-8237821 Gossypium raimondii
Gorai.001G079100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 8235822-8237821 Gossypium raimondii
Gorai.001G079100 5.0kb upstream 5.0kb upstream 13620 true Chr01: 8222202-8235821 Gossypium raimondii
Gorai.001G079100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 8222202-8227201 Gossypium raimondii
Gorai.001G079100 5.0kb downstream 5.0kb downstream 13620 true Chr01: 8227202-8240821 Gossypium raimondii
Gorai.001G079100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 8235822-8240821 Gossypium raimondii
Gorai.001G079100 10.0kb upstream 10.0kb upstream 18620 true Chr01: 8217202-8235821 Gossypium raimondii
Gorai.001G079100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 8217202-8227201 Gossypium raimondii
Gorai.001G079100 10.0kb downstream 10.0kb downstream 18620 true Chr01: 8227202-8245821 Gossypium raimondii
Gorai.001G079100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 8235822-8245821 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840530 5264 Brassicales-Malvales View MSA
124345117 5266 SBM View MSA
124241219 5268 Malvidae View MSA
124060590 5270 Rosid View MSA
123742205 5271 Pentapetalae View MSA
122791083 5272 Eudicot View MSA
122048007 5273 Angiosperm View MSA
121347127 5274 Embryophyte View MSA
123427898 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain