Gene : Gorai.001G117200 G. raimondii v2.1
Defline:  (1 of 1) PTHR21266:SF24 - PHEOPHORBIDE A OXYGENASE, CHLOROPLASTIC Genomic Order:  1172
Name:  ? Gorai.001G117200 Secondary Identifier:  ? PAC:26820373
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5098 Gossypium raimondii pathologic  
Graimondii PWY-6927 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G117200 0.5kb upstream 0.5kb upstream 3956 true Chr01: 14070004-14073959 Gossypium raimondii
Gorai.001G117200 0.5kb upstream 0.5kb upstream 500 false Chr01: 14073460-14073959 Gossypium raimondii
Gorai.001G117200 0.5kb downstream 0.5kb downstream 3956 true Chr01: 14069504-14073459 Gossypium raimondii
Gorai.001G117200 0.5kb downstream 0.5kb downstream 500 false Chr01: 14069504-14070003 Gossypium raimondii
Gorai.001G117200 1.0kb upstream 1.0kb upstream 4456 true Chr01: 14070004-14074459 Gossypium raimondii
Gorai.001G117200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 14073460-14074459 Gossypium raimondii
Gorai.001G117200 1.0kb downstream 1.0kb downstream 4456 true Chr01: 14069004-14073459 Gossypium raimondii
Gorai.001G117200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 14069004-14070003 Gossypium raimondii
Gorai.001G117200 2.0kb upstream 2.0kb upstream 5456 true Chr01: 14070004-14075459 Gossypium raimondii
Gorai.001G117200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 14073460-14075459 Gossypium raimondii
Gorai.001G117200 2.0kb downstream 2.0kb downstream 5456 true Chr01: 14068004-14073459 Gossypium raimondii
Gorai.001G117200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 14068004-14070003 Gossypium raimondii
Gorai.001G117200 5.0kb upstream 5.0kb upstream 8456 true Chr01: 14070004-14078459 Gossypium raimondii
Gorai.001G117200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 14073460-14078459 Gossypium raimondii
Gorai.001G117200 5.0kb downstream 5.0kb downstream 8456 true Chr01: 14065004-14073459 Gossypium raimondii
Gorai.001G117200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 14065004-14070003 Gossypium raimondii
Gorai.001G117200 10.0kb upstream 10.0kb upstream 13456 true Chr01: 14070004-14083459 Gossypium raimondii
Gorai.001G117200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 14073460-14083459 Gossypium raimondii
Gorai.001G117200 10.0kb downstream 10.0kb downstream 13456 true Chr01: 14060004-14073459 Gossypium raimondii
Gorai.001G117200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 14060004-14070003 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834068 5264 Brassicales-Malvales View MSA
124342673 5266 SBM View MSA
124241153 5268 Malvidae View MSA
124063848 5270 Rosid View MSA
123748606 5271 Pentapetalae View MSA
122790785 5272 Eudicot View MSA
122042360 5273 Angiosperm View MSA
123429167 5275 Viridiplantae View MSA
121346632 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain