Gene : Gorai.001G123400 G. raimondii v2.1
Defline:  (1 of 2) PTHR23088//PTHR23088:SF31 - NITRILASE-RELATED Genomic Order:  1234
Name:  ? Gorai.001G123400 Secondary Identifier:  ? PAC:26821069
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii ASPARAGINE-DEG1-PWY Gossypium raimondii pathologic  
Graimondii ASPSYNII-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G123400 0.5kb upstream 0.5kb upstream 4082 true Chr01: 15408794-15412875 Gossypium raimondii
Gorai.001G123400 0.5kb upstream 0.5kb upstream 500 false Chr01: 15412376-15412875 Gossypium raimondii
Gorai.001G123400 0.5kb downstream 0.5kb downstream 4082 true Chr01: 15408294-15412375 Gossypium raimondii
Gorai.001G123400 0.5kb downstream 0.5kb downstream 500 false Chr01: 15408294-15408793 Gossypium raimondii
Gorai.001G123400 1.0kb upstream 1.0kb upstream 4582 true Chr01: 15408794-15413375 Gossypium raimondii
Gorai.001G123400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 15412376-15413375 Gossypium raimondii
Gorai.001G123400 1.0kb downstream 1.0kb downstream 4582 true Chr01: 15407794-15412375 Gossypium raimondii
Gorai.001G123400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 15407794-15408793 Gossypium raimondii
Gorai.001G123400 2.0kb upstream 2.0kb upstream 5582 true Chr01: 15408794-15414375 Gossypium raimondii
Gorai.001G123400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 15412376-15414375 Gossypium raimondii
Gorai.001G123400 2.0kb downstream 2.0kb downstream 5582 true Chr01: 15406794-15412375 Gossypium raimondii
Gorai.001G123400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 15406794-15408793 Gossypium raimondii
Gorai.001G123400 5.0kb upstream 5.0kb upstream 8582 true Chr01: 15408794-15417375 Gossypium raimondii
Gorai.001G123400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 15412376-15417375 Gossypium raimondii
Gorai.001G123400 5.0kb downstream 5.0kb downstream 8582 true Chr01: 15403794-15412375 Gossypium raimondii
Gorai.001G123400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 15403794-15408793 Gossypium raimondii
Gorai.001G123400 10.0kb upstream 10.0kb upstream 13582 true Chr01: 15408794-15422375 Gossypium raimondii
Gorai.001G123400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 15412376-15422375 Gossypium raimondii
Gorai.001G123400 10.0kb downstream 10.0kb downstream 13582 true Chr01: 15398794-15412375 Gossypium raimondii
Gorai.001G123400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 15398794-15408793 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835096 5264 Brassicales-Malvales View MSA
124343016 5266 SBM View MSA
124248839 5268 Malvidae View MSA
124063597 5270 Rosid View MSA
123751549 5271 Pentapetalae View MSA
122796633 5272 Eudicot View MSA
122043736 5273 Angiosperm View MSA
121347314 5274 Embryophyte View MSA
123380526 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain