Gene : Gorai.001G131700 G. raimondii v2.1
Defline:  (1 of 7) PF06830 - Root cap (Root_cap) Genomic Order:  1317
Name:  ? Gorai.001G131700 Secondary Identifier:  ? PAC:26819591
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G131700 0.5kb upstream 0.5kb upstream 1849 true Chr01: 16847504-16849352 Gossypium raimondii
Gorai.001G131700 0.5kb upstream 0.5kb upstream 500 false Chr01: 16848853-16849352 Gossypium raimondii
Gorai.001G131700 0.5kb downstream 0.5kb downstream 1849 true Chr01: 16847004-16848852 Gossypium raimondii
Gorai.001G131700 0.5kb downstream 0.5kb downstream 500 false Chr01: 16847004-16847503 Gossypium raimondii
Gorai.001G131700 1.0kb upstream 1.0kb upstream 2349 true Chr01: 16847504-16849852 Gossypium raimondii
Gorai.001G131700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 16848853-16849852 Gossypium raimondii
Gorai.001G131700 1.0kb downstream 1.0kb downstream 2349 true Chr01: 16846504-16848852 Gossypium raimondii
Gorai.001G131700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 16846504-16847503 Gossypium raimondii
Gorai.001G131700 2.0kb upstream 2.0kb upstream 3349 true Chr01: 16847504-16850852 Gossypium raimondii
Gorai.001G131700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 16848853-16850852 Gossypium raimondii
Gorai.001G131700 2.0kb downstream 2.0kb downstream 3349 true Chr01: 16845504-16848852 Gossypium raimondii
Gorai.001G131700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 16845504-16847503 Gossypium raimondii
Gorai.001G131700 5.0kb upstream 5.0kb upstream 6349 true Chr01: 16847504-16853852 Gossypium raimondii
Gorai.001G131700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 16848853-16853852 Gossypium raimondii
Gorai.001G131700 5.0kb downstream 5.0kb downstream 6349 true Chr01: 16842504-16848852 Gossypium raimondii
Gorai.001G131700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 16842504-16847503 Gossypium raimondii
Gorai.001G131700 10.0kb upstream 10.0kb upstream 11349 true Chr01: 16847504-16858852 Gossypium raimondii
Gorai.001G131700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 16848853-16858852 Gossypium raimondii
Gorai.001G131700 10.0kb downstream 10.0kb downstream 11349 true Chr01: 16837504-16848852 Gossypium raimondii
Gorai.001G131700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 16837504-16847503 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835424 5264 Brassicales-Malvales View MSA
124343378 5266 SBM View MSA
124246752 5268 Malvidae View MSA
124061597 5270 Rosid View MSA
123752203 5271 Pentapetalae View MSA
122797654 5272 Eudicot View MSA
122050447 5273 Angiosperm View MSA
121349873 5274 Embryophyte View MSA
123381481 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain