Gene : Gorai.001G135600 G. raimondii v2.1
Defline:  (1 of 2) 4.1.3.4 - Hydroxymethylglutaryl-CoA lyase / HMG-CoA lyase Genomic Order:  1356
Name:  ? Gorai.001G135600 Secondary Identifier:  ? PAC:26823335
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii LEU-DEG2-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G135600 0.5kb upstream 0.5kb upstream 8926 true Chr01: 17708844-17717769 Gossypium raimondii
Gorai.001G135600 0.5kb upstream 0.5kb upstream 500 false Chr01: 17708844-17709343 Gossypium raimondii
Gorai.001G135600 0.5kb downstream 0.5kb downstream 8926 true Chr01: 17709344-17718269 Gossypium raimondii
Gorai.001G135600 0.5kb downstream 0.5kb downstream 500 false Chr01: 17717770-17718269 Gossypium raimondii
Gorai.001G135600 1.0kb upstream 1.0kb upstream 9426 true Chr01: 17708344-17717769 Gossypium raimondii
Gorai.001G135600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 17708344-17709343 Gossypium raimondii
Gorai.001G135600 1.0kb downstream 1.0kb downstream 9426 true Chr01: 17709344-17718769 Gossypium raimondii
Gorai.001G135600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 17717770-17718769 Gossypium raimondii
Gorai.001G135600 2.0kb upstream 2.0kb upstream 10426 true Chr01: 17707344-17717769 Gossypium raimondii
Gorai.001G135600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 17707344-17709343 Gossypium raimondii
Gorai.001G135600 2.0kb downstream 2.0kb downstream 10426 true Chr01: 17709344-17719769 Gossypium raimondii
Gorai.001G135600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 17717770-17719769 Gossypium raimondii
Gorai.001G135600 5.0kb upstream 5.0kb upstream 13426 true Chr01: 17704344-17717769 Gossypium raimondii
Gorai.001G135600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 17704344-17709343 Gossypium raimondii
Gorai.001G135600 5.0kb downstream 5.0kb downstream 13426 true Chr01: 17709344-17722769 Gossypium raimondii
Gorai.001G135600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 17717770-17722769 Gossypium raimondii
Gorai.001G135600 10.0kb upstream 10.0kb upstream 18426 true Chr01: 17699344-17717769 Gossypium raimondii
Gorai.001G135600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 17699344-17709343 Gossypium raimondii
Gorai.001G135600 10.0kb downstream 10.0kb downstream 18426 true Chr01: 17709344-17727769 Gossypium raimondii
Gorai.001G135600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 17717770-17727769 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834510 5264 Brassicales-Malvales View MSA
124345181 5266 SBM View MSA
124245610 5268 Malvidae View MSA
124074648 5270 Rosid View MSA
123743387 5271 Pentapetalae View MSA
122790168 5272 Eudicot View MSA
122045409 5273 Angiosperm View MSA
121347999 5274 Embryophyte View MSA
123426187 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain