Gene : Gorai.001G139800 G. raimondii v2.1
Defline:  (1 of 91) PF13456 - Reverse transcriptase-like (RVT_3) Genomic Order:  1398
Name:  ? Gorai.001G139800 Secondary Identifier:  ? PAC:26822031
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G139800 0.5kb upstream 0.5kb upstream 821 true Chr01: 18662539-18663359 Gossypium raimondii
Gorai.001G139800 0.5kb upstream 0.5kb upstream 500 false Chr01: 18662539-18663038 Gossypium raimondii
Gorai.001G139800 0.5kb downstream 0.5kb downstream 821 true Chr01: 18663039-18663859 Gossypium raimondii
Gorai.001G139800 0.5kb downstream 0.5kb downstream 500 false Chr01: 18663360-18663859 Gossypium raimondii
Gorai.001G139800 1.0kb upstream 1.0kb upstream 1321 true Chr01: 18662039-18663359 Gossypium raimondii
Gorai.001G139800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 18662039-18663038 Gossypium raimondii
Gorai.001G139800 1.0kb downstream 1.0kb downstream 1321 true Chr01: 18663039-18664359 Gossypium raimondii
Gorai.001G139800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 18663360-18664359 Gossypium raimondii
Gorai.001G139800 2.0kb upstream 2.0kb upstream 2321 true Chr01: 18661039-18663359 Gossypium raimondii
Gorai.001G139800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 18661039-18663038 Gossypium raimondii
Gorai.001G139800 2.0kb downstream 2.0kb downstream 2321 true Chr01: 18663039-18665359 Gossypium raimondii
Gorai.001G139800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 18663360-18665359 Gossypium raimondii
Gorai.001G139800 5.0kb upstream 5.0kb upstream 5321 true Chr01: 18658039-18663359 Gossypium raimondii
Gorai.001G139800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 18658039-18663038 Gossypium raimondii
Gorai.001G139800 5.0kb downstream 5.0kb downstream 5321 true Chr01: 18663039-18668359 Gossypium raimondii
Gorai.001G139800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 18663360-18668359 Gossypium raimondii
Gorai.001G139800 10.0kb upstream 10.0kb upstream 10321 true Chr01: 18653039-18663359 Gossypium raimondii
Gorai.001G139800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 18653039-18663038 Gossypium raimondii
Gorai.001G139800 10.0kb downstream 10.0kb downstream 10321 true Chr01: 18663039-18673359 Gossypium raimondii
Gorai.001G139800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 18663360-18673359 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824382 5264 Brassicales-Malvales View MSA
124320163 5266 SBM View MSA
124248393 5268 Malvidae View MSA
123952252 5270 Rosid View MSA
123753554 5271 Pentapetalae View MSA
122797941 5272 Eudicot View MSA
122051690 5273 Angiosperm View MSA
121351675 5274 Embryophyte View MSA
123428354 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain