Gene : Gorai.001G163400 G. raimondii v2.1
Defline:  (1 of 1) PTHR22773:SF50 - NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 5 Genomic Order:  1634
Name:  ? Gorai.001G163400 Secondary Identifier:  ? PAC:26822686
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-3781 Gossypium raimondii pathologic  
Graimondii PWY-4302 Gossypium raimondii pathologic  
Graimondii PWY-5083 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G163400 0.5kb upstream 0.5kb upstream 3370 true Chr01: 23450698-23454067 Gossypium raimondii
Gorai.001G163400 0.5kb upstream 0.5kb upstream 500 false Chr01: 23450698-23451197 Gossypium raimondii
Gorai.001G163400 0.5kb downstream 0.5kb downstream 3370 true Chr01: 23451198-23454567 Gossypium raimondii
Gorai.001G163400 0.5kb downstream 0.5kb downstream 500 false Chr01: 23454068-23454567 Gossypium raimondii
Gorai.001G163400 1.0kb upstream 1.0kb upstream 3870 true Chr01: 23450198-23454067 Gossypium raimondii
Gorai.001G163400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 23450198-23451197 Gossypium raimondii
Gorai.001G163400 1.0kb downstream 1.0kb downstream 3870 true Chr01: 23451198-23455067 Gossypium raimondii
Gorai.001G163400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 23454068-23455067 Gossypium raimondii
Gorai.001G163400 2.0kb upstream 2.0kb upstream 4870 true Chr01: 23449198-23454067 Gossypium raimondii
Gorai.001G163400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 23449198-23451197 Gossypium raimondii
Gorai.001G163400 2.0kb downstream 2.0kb downstream 4870 true Chr01: 23451198-23456067 Gossypium raimondii
Gorai.001G163400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 23454068-23456067 Gossypium raimondii
Gorai.001G163400 5.0kb upstream 5.0kb upstream 7870 true Chr01: 23446198-23454067 Gossypium raimondii
Gorai.001G163400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 23446198-23451197 Gossypium raimondii
Gorai.001G163400 5.0kb downstream 5.0kb downstream 7870 true Chr01: 23451198-23459067 Gossypium raimondii
Gorai.001G163400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 23454068-23459067 Gossypium raimondii
Gorai.001G163400 10.0kb upstream 10.0kb upstream 12870 true Chr01: 23441198-23454067 Gossypium raimondii
Gorai.001G163400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 23441198-23451197 Gossypium raimondii
Gorai.001G163400 10.0kb downstream 10.0kb downstream 12870 true Chr01: 23451198-23464067 Gossypium raimondii
Gorai.001G163400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 23454068-23464067 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123804340 5264 Brassicales-Malvales Singleton cluster - no MSA
124301373 5266 SBM Singleton cluster - no MSA
124152375 5268 Malvidae Singleton cluster - no MSA
123877640 5270 Rosid Singleton cluster - no MSA
123753255 5271 Pentapetalae View MSA
122797410 5272 Eudicot View MSA
122049707 5273 Angiosperm View MSA
121351606 5274 Embryophyte View MSA
123428700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain