Gene : Gorai.001G162900 G. raimondii v2.1
Defline:  (1 of 4) PTHR15184:SF3 - ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL Genomic Order:  1629
Name:  ? Gorai.001G162900 Secondary Identifier:  ? PAC:26823148
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-6126 Gossypium raimondii pathologic  
Graimondii PWY-7219 Gossypium raimondii pathologic  
Graimondii PWY-7229 Gossypium raimondii pathologic  
Graimondii PWY-841 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G162900 0.5kb upstream 0.5kb upstream 3687 true Chr01: 23380542-23384228 Gossypium raimondii
Gorai.001G162900 0.5kb upstream 0.5kb upstream 500 false Chr01: 23383729-23384228 Gossypium raimondii
Gorai.001G162900 0.5kb downstream 0.5kb downstream 3687 true Chr01: 23380042-23383728 Gossypium raimondii
Gorai.001G162900 0.5kb downstream 0.5kb downstream 500 false Chr01: 23380042-23380541 Gossypium raimondii
Gorai.001G162900 1.0kb upstream 1.0kb upstream 4187 true Chr01: 23380542-23384728 Gossypium raimondii
Gorai.001G162900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 23383729-23384728 Gossypium raimondii
Gorai.001G162900 1.0kb downstream 1.0kb downstream 4187 true Chr01: 23379542-23383728 Gossypium raimondii
Gorai.001G162900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 23379542-23380541 Gossypium raimondii
Gorai.001G162900 2.0kb upstream 2.0kb upstream 5187 true Chr01: 23380542-23385728 Gossypium raimondii
Gorai.001G162900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 23383729-23385728 Gossypium raimondii
Gorai.001G162900 2.0kb downstream 2.0kb downstream 5187 true Chr01: 23378542-23383728 Gossypium raimondii
Gorai.001G162900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 23378542-23380541 Gossypium raimondii
Gorai.001G162900 5.0kb upstream 5.0kb upstream 8187 true Chr01: 23380542-23388728 Gossypium raimondii
Gorai.001G162900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 23383729-23388728 Gossypium raimondii
Gorai.001G162900 5.0kb downstream 5.0kb downstream 8187 true Chr01: 23375542-23383728 Gossypium raimondii
Gorai.001G162900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 23375542-23380541 Gossypium raimondii
Gorai.001G162900 10.0kb upstream 10.0kb upstream 13187 true Chr01: 23380542-23393728 Gossypium raimondii
Gorai.001G162900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 23383729-23393728 Gossypium raimondii
Gorai.001G162900 10.0kb downstream 10.0kb downstream 13187 true Chr01: 23370542-23383728 Gossypium raimondii
Gorai.001G162900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 23370542-23380541 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123804410 5264 Brassicales-Malvales Singleton cluster - no MSA
124301440 5266 SBM Singleton cluster - no MSA
124253426 5268 Malvidae View MSA
124064158 5270 Rosid View MSA
123753752 5271 Pentapetalae View MSA
122797462 5272 Eudicot View MSA
122051574 5273 Angiosperm View MSA
123429126 5275 Viridiplantae View MSA
121351571 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain