Gene : Gorai.001G156600 G. raimondii v2.1
Defline:  (1 of 5) PTHR31901:SF3 - JASMONIC ACID-AMIDO SYNTHETASE JAR1 Genomic Order:  1566
Name:  ? Gorai.001G156600 Secondary Identifier:  ? PAC:26823262
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G156600 0.5kb upstream 0.5kb upstream 5139 true Chr01: 22194460-22199598 Gossypium raimondii
Gorai.001G156600 0.5kb upstream 0.5kb upstream 500 false Chr01: 22199099-22199598 Gossypium raimondii
Gorai.001G156600 0.5kb downstream 0.5kb downstream 5139 true Chr01: 22193960-22199098 Gossypium raimondii
Gorai.001G156600 0.5kb downstream 0.5kb downstream 500 false Chr01: 22193960-22194459 Gossypium raimondii
Gorai.001G156600 1.0kb upstream 1.0kb upstream 5639 true Chr01: 22194460-22200098 Gossypium raimondii
Gorai.001G156600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 22199099-22200098 Gossypium raimondii
Gorai.001G156600 1.0kb downstream 1.0kb downstream 5639 true Chr01: 22193460-22199098 Gossypium raimondii
Gorai.001G156600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 22193460-22194459 Gossypium raimondii
Gorai.001G156600 2.0kb upstream 2.0kb upstream 6639 true Chr01: 22194460-22201098 Gossypium raimondii
Gorai.001G156600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 22199099-22201098 Gossypium raimondii
Gorai.001G156600 2.0kb downstream 2.0kb downstream 6639 true Chr01: 22192460-22199098 Gossypium raimondii
Gorai.001G156600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 22192460-22194459 Gossypium raimondii
Gorai.001G156600 5.0kb upstream 5.0kb upstream 9639 true Chr01: 22194460-22204098 Gossypium raimondii
Gorai.001G156600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 22199099-22204098 Gossypium raimondii
Gorai.001G156600 5.0kb downstream 5.0kb downstream 9639 true Chr01: 22189460-22199098 Gossypium raimondii
Gorai.001G156600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 22189460-22194459 Gossypium raimondii
Gorai.001G156600 10.0kb upstream 10.0kb upstream 14639 true Chr01: 22194460-22209098 Gossypium raimondii
Gorai.001G156600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 22199099-22209098 Gossypium raimondii
Gorai.001G156600 10.0kb downstream 10.0kb downstream 14639 true Chr01: 22184460-22199098 Gossypium raimondii
Gorai.001G156600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 22184460-22194459 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123804425 5264 Brassicales-Malvales Singleton cluster - no MSA
124351107 5266 SBM View MSA
124245184 5268 Malvidae View MSA
124063080 5270 Rosid View MSA
123741688 5271 Pentapetalae View MSA
122793518 5272 Eudicot View MSA
122043357 5273 Angiosperm View MSA
121349637 5274 Embryophyte View MSA
123381383 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain